RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 CLUL1Q15846 466 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 PTCRAQ6ISU1 281 aaPredicted RBP16■□□□□ 0.15
CSNK2A1-209ENST00000609606 TMC5Q6UXY8 1006 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 PHF6Q8IWS0 365 aaKnown RBP eCLIP16■□□□□ 0.15
CSNK2A1-209ENST00000609606 DHX40Q8IX18 779 aaKnown RBP16■□□□□ 0.15
CSNK2A1-209ENST00000609606 ATAD1Q8NBU5 361 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 TATDN2Q93075 761 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 ZNF707Q96C28 371 aaPredicted RBP16■□□□□ 0.15
CSNK2A1-209ENST00000609606 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
CSNK2A1-209ENST00000609606 TNIP3Q96KP6 325 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 NECTIN4Q96NY8 510 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 NT5C1BQ96P26 610 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 PGLYRP2Q96PD5 576 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 ASB2Q96Q27 587 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 HSD3B7Q9H2F3 369 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 CRTAC1Q9NQ79 661 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.153e-6■■■■■ 40.4
CSNK2A1-209ENST00000609606 USP15Q9Y4E8 981 aaPredicted RBP16■□□□□ 0.15
CSNK2A1-209ENST00000609606 PCDHB5Q9Y5E4 795 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 INSL5Q9Y5Q6 135 aa16■□□□□ 0.15
CSNK2A1-209ENST00000609606 DENND4AQ7Z401 1863 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 C5orf42Q9H799 3197 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 MYBPHLA2RUH7 354 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 LRRC10BA6NIK2 292 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 HCRTO43612 131 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 ATP2C2O75185 946 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 PDGFRBP09619 1106 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 PTPN1P18031 435 aaKnown RBP15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 TUFMP49411 452 aaKnown RBP15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 NDST1P52848 882 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 DUSP4Q13115 394 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 PLD1Q13393 1074 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 CUL2Q13617 745 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 IQCB1Q15051 598 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 KRT31Q15323 416 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 SMAD2Q15796 467 aaKnown RBP15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 CFAP221Q4G0U5 840 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 ATAT1Q5SQI0 421 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 GBP6Q6ZN66 633 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 C4orf50Q6ZRC1 276 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 CRYBG2Q8N1P7 616 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 ANKRD20A12PQ8NF67 263 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 MYCBPAPQ8TBZ2 947 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 RIPOR3Q96MK2 946 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 DNAI2Q9GZS0 605 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 INTS2Q9H0H0 1204 aaKnown RBP15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 TMLHEQ9NVH6 421 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 GCNT4Q9P109 453 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 LIMA1Q9UHB6 759 aaKnown RBP15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 GTF3C4Q9UKN8 822 aa15.99■□□□□ 0.15
CSNK2A1-209ENST00000609606 XYLBO75191 536 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 CILPO75339 1184 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 LRG1P02750 347 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 TPM2P07951 284 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 KCNQ1P51787 676 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 PSMC1P62191 440 aaKnown RBP15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 GCNT1Q02742 428 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 CBX2Q14781 532 aaPredicted RBP15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 EXOC3L4Q17RC7 722 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 SMYD5Q6GMV2 418 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 TRIM65Q6PJ69 517 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 SMG7Q92540 1137 aaKnown RBP15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 NOTCH4Q99466 2003 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 APOL5Q9BWW9 433 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 NT5C1AQ9BXI3 368 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 CRISPLD1Q9H336 500 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 DPEP3Q9H4B8 488 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 CISHQ9NSE2 258 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 ABI2Q9NYB9 513 aaPredicted RBP15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 YIPF1Q9Y548 306 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 MYH10P35580 1976 aa15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 TCF20Q9UGU0 1960 aaKnown RBP15.98■□□□□ 0.15
CSNK2A1-209ENST00000609606 BECN2A8MW95 431 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 HAPLN1P10915 354 aaPredicted RBP15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 BMP1P13497 986 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 MAGEA11P43364 429 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 ALDH1A3P47895 512 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 LRMPQ12912 555 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 SPATA2LQ8IUW3 424 aaPredicted RBP15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 UBR7Q8N806 425 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 MYLPFQ96A32 169 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 JAKMIP2Q96AA8 810 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 PCED1BQ96HM7 432 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 FAM81BQ96LP2 452 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 ARID3AQ99856 593 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 CRACR2AQ9BSW2 395 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 CBX8Q9HC52 389 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 TAB2Q9NYJ8 693 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 HMGXB4Q9UGU5 601 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 SLC27A5Q9Y2P5 690 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 ASB3Q9Y575 518 aa15.97■□□□□ 0.15
CSNK2A1-209ENST00000609606 DOCK8Q8NF50 2099 aa15.96■□□□□ 0.15
CSNK2A1-209ENST00000609606 NCOR1O75376 2440 aa15.96■□□□□ 0.15
CSNK2A1-209ENST00000609606 GREB1Q4ZG55 1949 aa15.96■□□□□ 0.15
CSNK2A1-209ENST00000609606 CCL16O15467 120 aa15.96■□□□□ 0.15
CSNK2A1-209ENST00000609606 CD58P19256 250 aa15.96■□□□□ 0.15
CSNK2A1-209ENST00000609606 CDK11BP21127 795 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms