RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 SCN1AP35498 2009 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 NOTCH4Q99466 2003 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 BTNL10A8MVZ5 291 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 C2CD4DB7Z1M9 353 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CLDN3O15551 220 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TGM5O43548 720 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CALUO43852 315 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 SRGAP2O75044 1071 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TBCAO75347 108 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 B3GAT3O94766 335 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 MOCS3O95396 460 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 GTF2BQ00403 316 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 KCNA1Q09470 495 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 GLE1Q53GS7 698 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TDRD12Q587J7 1177 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CCDC181Q5TID7 509 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 HGSNATQ68CP4 663 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CCNI2Q6ZMN8 369 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CREG2Q8IUH2 290 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 SCFD1Q8WVM8 642 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 BICD1Q96G01 975 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 OSBPL9Q96SU4 736 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TTPALQ9BTX7 342 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 C1QTNF1Q9BXJ1 281 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 METTL14Q9HCE5 456 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 PLCB1Q9NQ66 1216 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TOPORSQ9NS56 1045 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 AIPL1Q9NZN9 384 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CWC15Q9P013 229 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TBC1D7Q9P0N9 293 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TUBGCP4Q9UGJ1 667 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TFR2Q9UP52 801 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CAPN6Q9Y6Q1 641 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 DUSP10Q9Y6W6 482 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 KMT2EQ8IZD2 1858 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 ERICH4A6NGS2 130 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TMEM189-UBE2V1I3L0A0 370 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 PODXLO00592 558 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 PDXKO00764 312 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 SLC16A3O15427 465 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 DCXO43602 365 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 NOL4O94818 638 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 GLUD1P00367 558 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 PIGRP01833 764 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 ADH1AP07327 375 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 KCNE1P15382 129 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 GAP43P17677 238 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TNFRSF8P28908 595 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TKTP29401 623 aaKnown RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 MATR3P43243 847 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 TNNT3P45378 269 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 LIG4P49917 911 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CASP5P51878 434 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 ADAM9Q13443 819 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 ASIC2Q16515 512 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 CES5AQ6NT32 575 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 LILRA6Q6PI73 481 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 APBB1IPQ7Z5R6 666 aaPredicted RBP11.28□□□□□ -0.6
LINC01001-203ENST00000607448 MAP4K3Q8IVH8 894 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 GOLGA6L1Q8N7Z2 621 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 GLIS3Q8NEA6 775 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 COG1Q8WTW3 980 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 SFXN1Q9H9B4 322 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 VPS18Q9P253 973 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 HPCAL4Q9UM19 191 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 SSX2IPQ9Y2D8 614 aa11.28□□□□□ -0.6
LINC01001-203ENST00000607448 MYO15AQ9UKN7 3530 aa11.27□□□□□ -0.6
LINC01001-203ENST00000607448 GRID2IPA4D2P6 1211 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.61
LINC01001-203ENST00000607448 GPR37L1O60883 481 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 PPP1R37O75864 691 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 COL9A1P20849 921 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 FGFR3P22607 806 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 POLR2FP61218 127 aaKnown RBP11.27□□□□□ -0.61
LINC01001-203ENST00000607448 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
LINC01001-203ENST00000607448 PSMD5Q16401 504 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 SLC18A3Q16572 532 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 IFI16Q16666 785 aaKnown RBP11.27□□□□□ -0.61
LINC01001-203ENST00000607448 KNOP1Q1ED39 458 aaKnown RBP11.27□□□□□ -0.61
LINC01001-203ENST00000607448 EPM2AIP1Q7L775 607 aaPredicted RBP11.27□□□□□ -0.61
LINC01001-203ENST00000607448 ZNF720Q7Z2F6 126 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 GPR149Q86SP6 731 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 ZSWIM2Q8NEG5 633 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 SPATA4Q8NEY3 305 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 GOLGA5Q8TBA6 731 aa11.27□□□□□ -0.61
LINC01001-203ENST00000607448 ZNF707Q96C28 371 aaPredicted RBP11.27□□□□□ -0.61
LINC01001-203ENST00000607448 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms