RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ECT2Q9H8V3 914 aa16.2■□□□□ 0.18
SSBP4-214ENST00000607020 TMEM9BQ9NQ34 198 aa16.2■□□□□ 0.18
SSBP4-214ENST00000607020 LARSQ9P2J5 1176 aaKnown RBP16.2■□□□□ 0.18
SSBP4-214ENST00000607020 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
SSBP4-214ENST00000607020 RALGAPA1Q6GYQ0 2036 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 ANKRD11Q6UB99 2663 aaPredicted RBP16.19■□□□□ 0.18
SSBP4-214ENST00000607020 TRIP11Q15643 1979 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 A0A0B4J269 797 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 PP2D1A8MPX8 630 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 MATR3P43243 847 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSBP4-214ENST00000607020 IL17AQ16552 155 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 JADE1Q6IE81 842 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 LRSAM1Q6UWE0 723 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 RASSF3Q86WH2 238 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 METTL23Q86XA0 190 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 CPA6Q8N4T0 437 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 RIN3Q8TB24 985 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 OSCP1Q8WVF1 389 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 MRPS31Q92665 395 aaKnown RBP16.19■□□□□ 0.18
SSBP4-214ENST00000607020 CD101Q93033 1021 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 LLPHQ9BRT6 129 aaKnown RBP16.19■□□□□ 0.18
SSBP4-214ENST00000607020 SCNM1Q9BWG6 230 aa16.19■□□□□ 0.18
SSBP4-214ENST00000607020 EVLQ9UI08 416 aaPredicted RBP16.19■□□□□ 0.18
SSBP4-214ENST00000607020 CPSF3Q9UKF6 684 aaKnown RBP16.19■□□□□ 0.18
SSBP4-214ENST00000607020 PKD1L2Q7Z442 2459 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 CYB561D2O14569 222 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 TOP3BO95985 862 aaKnown RBP16.18■□□□□ 0.18
SSBP4-214ENST00000607020 CSH1P0DML2 217 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 CSH2P0DML3 217 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 SPINK2P20155 84 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 U2AF2P26368 475 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSBP4-214ENST00000607020 LIG4P49917 911 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
SSBP4-214ENST00000607020 DGKEP52429 567 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 POU5F1Q01860 360 aaKnown RBP16.18■□□□□ 0.18
SSBP4-214ENST00000607020 FAM160A1Q05DH4 1040 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 NBR1Q14596 966 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 NAIF1Q69YI7 327 aaPredicted RBP16.18■□□□□ 0.18
SSBP4-214ENST00000607020 TXNDC8Q6A555 127 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 DCP1BQ8IZD4 617 aaKnown RBP16.18■□□□□ 0.18
SSBP4-214ENST00000607020 BICD1Q96G01 975 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 ASB7Q9H672 318 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 NEUROG3Q9Y4Z2 214 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 LAMA1P25391 3075 aa16.18■□□□□ 0.18
SSBP4-214ENST00000607020 TCF3P15923 654 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 NMT1P30419 496 aaKnown RBP16.17■□□□□ 0.18
SSBP4-214ENST00000607020 GBP1P32455 592 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 NEK4P51957 841 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 SLC12A3P55017 1021 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 IRX4P78413 519 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 RAD51AP2Q09MP3 1159 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 MTF1Q14872 753 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 DTHD1Q6ZMT9 781 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 TSTD1Q8NFU3 115 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 USP33Q8TEY7 942 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 ATP2A3Q93084 1043 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 CNOT6LQ96LI5 555 aaKnown RBP16.17■□□□□ 0.18
SSBP4-214ENST00000607020 MYRFLQ96LU7 910 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 TMEM206Q9H813 350 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
SSBP4-214ENST00000607020 C2CD2Q9Y426 696 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 PCDHB6Q9Y5E3 794 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 PCDHB5Q9Y5E4 795 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 ASPMQ8IZT6 3477 aa16.17■□□□□ 0.18
SSBP4-214ENST00000607020 UPK3BL1B0FP48 263 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 UPK3BL2E5RIL1 263 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 NFICP08651 508 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 TAF6P49848 677 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 LMAN2Q12907 356 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 NR1H3Q13133 447 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 TMEM132DQ14C87 1099 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 ZNF77Q15935 545 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 EML3Q32P44 896 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 WSCD1Q658N2 575 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 CYP2U1Q7Z449 544 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 OLIG1Q8TAK6 271 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 LEO1Q8WVC0 666 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-214ENST00000607020 TRMT2BQ96GJ1 504 aaKnown RBP16.16■□□□□ 0.18
SSBP4-214ENST00000607020 PNMA5Q96PV4 448 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-214ENST00000607020 UXTQ9UBK9 157 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-214ENST00000607020 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 MSRB2Q9Y3D2 182 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 SPAG17Q6Q759 2223 aa16.16■□□□□ 0.18
SSBP4-214ENST00000607020 FAM221BA6H8Z2 402 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 HNRNPDLO14979 420 aaKnown RBP16.15■□□□□ 0.18
SSBP4-214ENST00000607020 NOL4O94818 638 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 PLA2G4BP0C869 781 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 RING1Q06587 406 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 USP4Q13107 963 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
SSBP4-214ENST00000607020 NFE2Q16621 373 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-214ENST00000607020 ARSHQ5FYA8 562 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 FAM212AQ96EL1 285 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
SSBP4-214ENST00000607020 MSTO1Q9BUK6 570 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 ABCB6Q9NP58 842 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 INVSQ9Y283 1065 aa16.15■□□□□ 0.18
SSBP4-214ENST00000607020 PATE3B3GLJ2 98 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 K7EQS6 105 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms