RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
CTSA-214ENST00000606788 C15orf59Q2T9L4 293 aaPredicted RBP16.79■□□□□ 0.28
CTSA-214ENST00000606788 SHCBP1Q8NEM2 672 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 MIS12Q9H081 205 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 IP6K2Q9UHH9 426 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 LSP1P33241 339 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 SLC1A1P43005 524 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 MTMR3Q13615 1198 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 FAM102AQ5T9C2 384 aaPredicted RBP16.79■□□□□ 0.28
CTSA-214ENST00000606788 SPRYD7Q5W111 196 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 OLFML2BQ68BL8 750 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 SCYL2Q6P3W7 929 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 TMEM40Q8WWA1 233 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 ADPGKQ9BRR6 497 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 CALN1Q9BXU9 219 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 PABPC3Q9H361 631 aaKnown RBP16.79■□□□□ 0.28
CTSA-214ENST00000606788 CDC42EP4Q9H3Q1 356 aaKnown RBP16.79■□□□□ 0.28
CTSA-214ENST00000606788 NMRK2Q9NPI5 230 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 GPATCH2LQ9NWQ4 482 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 CNTN6Q9UQ52 1028 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 IFNAR2P48551 515 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 DGKDQ16760 1214 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 OR6B2Q6IFH4 312 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 LRRC19Q9H756 370 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 ANAPC5Q9UJX4 755 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 LAMA3Q16787 3333 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 IGF2BP3O00425 579 aaKnown RBP eCLIP16.78■□□□□ 0.28
CTSA-214ENST00000606788 TP73O15350 636 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 TREHO43280 583 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 CALB1P05937 261 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 CYP2C9P11712 490 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 CREB1P16220 341 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 IGFBP6P24592 240 aaPredicted RBP16.78■□□□□ 0.28
CTSA-214ENST00000606788 P3H1Q32P28 736 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 MRPL45Q9BRJ2 306 aaKnown RBP16.78■□□□□ 0.28
CTSA-214ENST00000606788 B3GNT5Q9BYG0 378 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 PIN4Q9Y237 131 aaKnown RBP16.78■□□□□ 0.28
CTSA-214ENST00000606788 ASAP2O43150 1006 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 CYP3A5P20815 502 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 RABGGTBP53611 331 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 AP3M2P53677 418 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 MMRN1Q13201 1228 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 SURF1Q15526 300 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 PPP2R5EQ16537 467 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 ARFGAP1Q8N6T3 406 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 SLITRK1Q96PX8 696 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 AAASQ9NRG9 546 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 PARP2Q9UGN5 583 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
CTSA-214ENST00000606788 SCN1AP35498 2009 aa16.77■□□□□ 0.28
CTSA-214ENST00000606788 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
CTSA-214ENST00000606788 MAGEB2O15479 319 aa16.77■□□□□ 0.28
CTSA-214ENST00000606788 GAS8O95995 478 aa16.77■□□□□ 0.28
CTSA-214ENST00000606788 ZNF618Q5T7W0 954 aa16.77■□□□□ 0.28
CTSA-214ENST00000606788 NETO2Q8NC67 525 aa16.77■□□□□ 0.28
CTSA-214ENST00000606788 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.77■□□□□ 0.28
CTSA-214ENST00000606788 TRIP12Q14669 1992 aaPredicted RBP16.77■□□□□ 0.28
CTSA-214ENST00000606788 E5RJQ4 531 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 SGK1O00141 431 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 SMIM10L2AP0DMW4 78 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 SMIM10L2BP0DMW5 78 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 FNTAP49354 379 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 ZNF157P51786 506 aaPredicted RBP16.77■□□□□ 0.27
CTSA-214ENST00000606788 YARSP54577 528 aaKnown RBP16.77■□□□□ 0.27
CTSA-214ENST00000606788 GAD2Q05329 585 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 LRRC14Q15048 493 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 TAF1CQ15572 869 aaPredicted RBP16.77■□□□□ 0.27
CTSA-214ENST00000606788 CYP1B1Q16678 543 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 IZUMO3Q5VZ72 239 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 CST9Q5W186 159 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 TAX1BP1Q86VP1 789 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 EXOC8Q8IYI6 725 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 OR6B3Q8NGW1 331 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 MAGEB5Q9BZ81 275 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 ABHD16BQ9H3Z7 469 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 TSPAN16Q9UKR8 245 aa16.77■□□□□ 0.27
CTSA-214ENST00000606788 LRRC37A2A6NM11 1700 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 KDM7AQ6ZMT4 941 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 SPOCD1Q6ZMY3 1216 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 ART4Q93070 314 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 PARK7Q99497 189 aaKnown RBP16.76■□□□□ 0.27
CTSA-214ENST00000606788 DPEP3Q9H4B8 488 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 RGS16O15492 202 aaPredicted RBP16.76■□□□□ 0.27
CTSA-214ENST00000606788 RIPK2O43353 540 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 STRNO43815 780 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 LRCH4O75427 683 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 IL18RAPO95256 599 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 CTSHP09668 335 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 MCF2P10911 925 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 MDH1P40925 334 aaKnown RBP16.76■□□□□ 0.27
CTSA-214ENST00000606788 GPS1Q13098 491 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 KLF1Q13351 362 aaPredicted RBP16.76■□□□□ 0.27
CTSA-214ENST00000606788 GRB14Q14449 540 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 TLK2Q86UE8 772 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 CD302Q8IX05 232 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 SCUBE3Q8IX30 993 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms