RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 CD302Q8IX05 232 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 FAXDC2Q96IV6 333 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 SNX27Q96L92 541 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 RUNDC3BQ96NL0 473 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 APBA2Q99767 749 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 ZFYVE28Q9HCC9 887 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 KLK14Q9P0G3 267 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.92■□□□□ 0.14
CCDC12-211ENST00000604367 TRPM7Q96QT4 1865 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 RECQL4O94761 1208 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 KRT1P04264 644 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 PSMA2P25787 234 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 ADAM17P78536 824 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 NFX1Q12986 1120 aaKnown RBP15.92■□□□□ 0.14
CCDC12-211ENST00000604367 PIGHQ14442 188 aaPredicted RBP15.92■□□□□ 0.14
CCDC12-211ENST00000604367 SNX17Q15036 470 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 SKIDA1Q1XH10 827 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 MAIP1Q8WWC4 291 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 DCLK3Q9C098 648 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 METTL5Q9NRN9 209 aaKnown RBP15.92■□□□□ 0.14
CCDC12-211ENST00000604367 ASIC3Q9UHC3 531 aa15.92■□□□□ 0.14
CCDC12-211ENST00000604367 H0YGN5 161 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 HAS3O00219 553 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 C6orf222P0C671 652 aaPredicted RBP15.91■□□□□ 0.14
CCDC12-211ENST00000604367 VDRP11473 427 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 TAP1Q03518 808 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 PDCLQ13371 301 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 MTMR3Q13615 1198 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 APBB1IPQ7Z5R6 666 aaPredicted RBP15.91■□□□□ 0.14
CCDC12-211ENST00000604367 C7orf31Q8N865 590 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 MRPL45Q9BRJ2 306 aaKnown RBP15.91■□□□□ 0.14
CCDC12-211ENST00000604367 NT5C1AQ9BXI3 368 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 PLEKHA5Q9HAU0 1116 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 NFS1Q9Y697 457 aa15.91■□□□□ 0.14
CCDC12-211ENST00000604367 C17orf102A2RUQ5 167 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 MYADML2A6NDP7 307 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 GOLGA6L10A6NI86 522 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 SIGLEC16A6NMB1 481 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 PPFIA2O75334 1257 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 KCNA4P22459 653 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 GPD2P43304 727 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 VPS41P49754 854 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 ZNF844Q08AG5 666 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 SMTNL2Q2TAL5 461 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 MFSD7Q6UXD7 560 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 XYLT1Q86Y38 959 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 SOCS4Q8WXH5 440 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 TSPAN16Q9UKR8 245 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 INCA1Q0VD86 236 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 IRF5Q13568 498 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 CNGA2Q16280 664 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 KCNT1Q5JUK3 1230 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 TTC19Q6DKK2 380 aaPredicted RBP15.9■□□□□ 0.14
CCDC12-211ENST00000604367 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 RAPGEF5Q92565 580 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 ZIC5Q96T25 663 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 PARP2Q9UGN5 583 aa15.9■□□□□ 0.14
CCDC12-211ENST00000604367 LRRD1A4D1F6 860 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 HMGCRP04035 888 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 SLC10A3P09131 477 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 MYZAPP0CAP1 466 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 CETN2P41208 172 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 ATP1A2P50993 1020 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 PMS2P54278 862 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 PURAQ00577 322 aaKnown RBP15.89■□□□□ 0.13
CCDC12-211ENST00000604367 CALCOCO2Q13137 446 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 ACOT1Q86TX2 421 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 CCDC25Q86WR0 208 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 RCOR2Q8IZ40 523 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 BEST2Q8NFU1 509 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 TXLNGYQ9BZA5 131 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 ZWILCHQ9H900 591 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 BCCIPQ9P287 314 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC12-211ENST00000604367 MTRF1LQ9UGC7 380 aaKnown RBP15.89■□□□□ 0.13
CCDC12-211ENST00000604367 STAU1O95793 577 aaKnown RBP15.89■□□□□ 0.13
CCDC12-211ENST00000604367 CYP3A5P20815 502 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 PPARDQ03181 441 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 ZBTB6Q15916 424 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 LRIG3Q6UXM1 1119 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 PRUNE1Q86TP1 453 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 SLCO2A1Q92959 643 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 HAUS1Q96CS2 278 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 RBM41Q96IZ5 413 aaKnown RBP15.89■□□□□ 0.13
CCDC12-211ENST00000604367 ATP6V1G3Q96LB4 118 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 KATNAL1Q9BW62 490 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 LRRC4CQ9HCJ2 640 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 FAM49BQ9NUQ9 324 aa15.89■□□□□ 0.13
CCDC12-211ENST00000604367 LRCH4O75427 683 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 GAS8O95995 478 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 AKR1A1P14550 325 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 GBP1P32455 592 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 GNASQ5JWF2 1037 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 FAM102AQ5T9C2 384 aaPredicted RBP15.88■□□□□ 0.13
CCDC12-211ENST00000604367 ARFGAP1Q8N6T3 406 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 NIPA2Q8N8Q9 360 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 TRPV1Q8NER1 839 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 ATL2Q8NHH9 583 aa15.88■□□□□ 0.13
CCDC12-211ENST00000604367 ART4Q93070 314 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms