RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 F11P03951 625 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 ADSSP30520 456 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 LHX1P48742 406 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 CDR1P51861 262 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 MYL7Q01449 175 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 GRIN1Q05586 938 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 BFSP1Q12934 665 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 RUNX3Q13761 415 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 HEATR6Q6AI08 1181 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 CC2D1AQ6P1N0 951 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 TXNDC11Q6PKC3 985 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 Q6ZS52 159 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 DPH6Q7L8W6 267 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 MON1AQ86VX9 555 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 SFR1Q86XK3 245 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 CCDC26Q8TAB7 109 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 EPSTI1Q96J88 318 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 LOXL4Q96JB6 756 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 CEP295NLQ96MC4 621 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 GDAP2Q9NXN4 497 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 ABI2Q9NYB9 513 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 ITGA11Q9UKX5 1188 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 CHD8Q9HCK8 2581 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 TRDMT1O14717 391 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 GDF9O60383 454 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 CD2BP2O95400 341 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 NLRP12P59046 1061 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 RBP5P82980 135 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 CUL4AQ13619 759 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 PON2Q15165 354 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 PDGFRLQ15198 375 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 SURF1Q15526 300 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 FBXO43Q4G163 708 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 STXBP4Q6ZWJ1 553 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 DYMQ7RTS9 669 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 BRSK2Q8IWQ3 736 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 GIPC2Q8TF65 315 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 TRMT2BQ96GJ1 504 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 ZFYVE19Q96K21 471 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 MYRFLQ96LU7 910 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 LRRC27Q9C0I9 530 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 SEMA4GQ9NTN9 838 aa19.17■□□□□ 0.66
SHKBP1-227ENST00000602011 SLC30A4O14863 429 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 PRPF40AO75400 957 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 AKAP3O75969 853 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 PRAMEF12O95522 483 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 HMGA1P17096 107 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 DRD1P21728 446 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 KCNA4P22459 653 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 PCSK1P29120 753 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 CYP4F8P98187 520 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 TFAMQ00059 246 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 TMEM196Q5HYL7 178 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 PPM1JQ5JR12 505 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 CEP68Q76N32 757 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 EFCAB13Q8IY85 973 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 SYCP3Q8IZU3 236 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 CAMKK1Q8N5S9 505 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 TOP6BLQ8N6T0 577 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 DNAJC19Q96DA6 116 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 FUBP3Q96I24 572 aaKnown RBP eCLIP19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 FAM213AQ9BRX8 229 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 AGAP1Q9UPQ3 857 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 SDK1Q7Z5N4 2213 aa19.16■□□□□ 0.66
SHKBP1-227ENST00000602011 EXTL3O43909 919 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 GCNT3O95395 438 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 PFKLP17858 780 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 PDE6CP51160 858 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 CFAP221Q4G0U5 840 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 PDCL2Q8N4E4 241 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 CSGALNACT2Q8N6G5 542 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 MAB21L3Q8N8X9 362 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 FSIP1Q8NA03 581 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 DDX43Q9NXZ2 648 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 RBAKQ9NYW8 714 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 EHD2Q9NZN4 543 aa19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-227ENST00000602011 FRMD3A2A2Y4 597 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 VPS37CA5D8V6 355 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 MYMKA6NI61 221 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 TISP43B9A030 160 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 NOL4O94818 638 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 ITGB3P05106 788 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 ADRB1P08588 477 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 POLR2BP30876 1174 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 TNK2Q07912 1038 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 MYO1EQ12965 1108 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 MAPRE1Q15691 268 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 INTS6LQ5JSJ4 861 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 CACNA2D4Q7Z3S7 1137 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 TMEM150AQ86TG1 271 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 KIAA1958Q8N8K9 716 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 C1orf127Q8N9H9 656 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 USP13Q92995 863 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 KIAA1586Q9HCI6 787 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 SLC8A2Q9UPR5 921 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 CLIC4Q9Y696 253 aa19.14■□□□□ 0.65
SHKBP1-227ENST00000602011 FAM163BP0C2L3 166 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 IDEP14735 1019 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms