RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	DDX19A	Q9NUU7	478 aa	Known RBP	13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	ABI2	Q9NYB9	513 aa	Predicted RBP	13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	TBX20	Q9UMR3	447 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	FREM2	Q5SZK8	3169 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	PCNX2	A6NKB5	2137 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	ABLIM1	O14639	778 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	GUCY2F	P51841	1108 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	NLRP12	P59046	1061 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	LILRA4	P59901	499 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	ZNF423	Q2M1K9	1284 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	TAS1R3	Q7RTX0	852 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	MON1A	Q86VX9	555 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	TMEM130	Q8N3G9	435 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	OR10T2	Q8NGX3	314 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	SPPL2B	Q8TCT7	592 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	C2orf15	Q8WU43	125 aa	Known RBP	13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	C17orf75	Q9HAS0	396 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	TRPC7	Q9HCX4	862 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	LRWD1	Q9UFC0	647 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	KCNG1	Q9UIX4	513 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	DSE	Q9UL01	958 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	DNM3	Q9UQ16	869 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	GPSM3	Q9Y4H4	160 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	GON4L	Q3T8J9	2241 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	ACACA	Q13085	2346 aa		13.29	□□□□□ -0.28
NUP62-223	ENST00000601665	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	TNFRSF10B	O14763	440 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	CTDNEP1	O95476	244 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	CKM	P06732	381 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	PAX3	P23760	479 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	GFPT1	Q06210	699 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	SMARCB1	Q12824	385 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	ZNF268	Q14587	947 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	ZNF174	Q15697	407 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	KYAT1	Q16773	422 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	COL28A1	Q2UY09	1125 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	LYSMD4	Q5XG99	296 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	ZPBP2	Q6X784	338 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	RASSF3	Q86WH2	238 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	TMEFF1	Q8IYR6	380 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	CCDC33	Q8N5R6	958 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	MDGA1	Q8NFP4	955 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	SNX29	Q8TEQ0	813 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	WHAMM	Q8TF30	809 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	OSCP1	Q8WVF1	389 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	FAM212A	Q96EL1	285 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	STK24	Q9Y6E0	443 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	WNT6	Q9Y6F9	365 aa		13.28	□□□□□ -0.28
NUP62-223	ENST00000601665	ZNF638	Q14966	1978 aa	Known RBP	13.27	□□□□□ -0.28
NUP62-223	ENST00000601665	TTC26	A0AVF1	554 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	SFI1	A8K8P3	1242 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	LACTBL1	A8MY62	500 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	OPHN1	O60890	802 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	F11	P03951	625 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	HAPLN1	P10915	354 aa	Predicted RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	FDPS	P14324	419 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	PTGER3	P43115	390 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	FAM160A1	Q05DH4	1040 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	MCL1	Q07820	350 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	SCAP	Q12770	1279 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	SEMA3B	Q13214	749 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	ORC2	Q13416	577 aa	Predicted RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	BYSL	Q13895	437 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	HNRNPD	Q14103	355 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	ECM1	Q16610	540 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	PIP4P1	Q86T03	277 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	DCP1B	Q8IZD4	617 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	DAW1	Q8N136	415 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	PGBD3	Q8N328	593 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	USP33	Q8TEY7	942 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	RLN3	Q8WXF3	142 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	EZH1	Q92800	747 aa	Predicted RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	RAB34	Q9BZG1	259 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	ZCWPW1	Q9H0M4	648 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	CCDC86	Q9H6F5	360 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	RPF1	Q9H9Y2	349 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	UXT	Q9UBK9	157 aa	Predicted RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	MMP17	Q9ULZ9	603 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	PCDHB9	Q9Y5E1	797 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	ATXN2	Q99700	1313 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	ASH1L	Q9NR48	2969 aa	Known RBP	13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	ADAMTS20	P59510	1910 aa		13.27	□□□□□ -0.29
NUP62-223	ENST00000601665	TRAV19	A0A0A6YYK7	116 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	UPK3BL1	B0FP48	263 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	UPK3BL2	E5RIL1	263 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665		E9PMD0	336 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	PPEF2	O14830	753 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	PRPF40A	O75400	957 aa	Known RBP	13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	ZIC2	O95409	532 aa	Predicted RBP	13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	NFATC1	O95644	943 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	USP17L7	P0C7H9	530 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	CSH1	P0DML2	217 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	CSH2	P0DML3	217 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	ANKRD1	Q15327	319 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	ZBTB6	Q15916	424 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	CRY1	Q16526	586 aa		13.26	□□□□□ -0.29
NUP62-223	ENST00000601665	SLC23A3	Q6PIS1	610 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms