RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 STKLD1Q8NE28 680 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 LEO1Q8WVC0 666 aaPredicted RBP19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 USP28Q96RU2 1077 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 PI4K2AQ9BTU6 479 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 PANK2Q9BZ23 570 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 HPS4Q9NQG7 708 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 GKN1Q9NS71 199 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 GDAP2Q9NXN4 497 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 ZMYM5Q9UJ78 669 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 NCOR2Q9Y618 2525 aa19.37■□□□□ 0.69
CHMP2A-208ENST00000601220 GOLGA8IPA6NC78 632 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 GOLGA8JA6NMD2 632 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 SOBPA7XYQ1 873 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 PRR5-ARHGAP8B1AHC4 643 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 GABRDO14764 452 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 EXTL3O43909 919 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 LDHAP00338 332 aaKnown RBP19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 ARHGAP8P85298 464 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 LMNB2Q03252 620 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 SRSF5Q13243 272 aaKnown RBP19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 ITPRIPL2Q3MIP1 535 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 SDHAF4Q5VUM1 108 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 TXNDC8Q6A555 127 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 CCDC73Q6ZRK6 1079 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 LIMS2Q7Z4I7 341 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 LONP2Q86WA8 852 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 MAB21L3Q8N8X9 362 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 GCNAQ96QF7 691 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 THG1LQ9NWX6 298 aaKnown RBP19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 RBAKQ9NYW8 714 aaPredicted RBP19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 GMEB2Q9UKD1 530 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 MTMR6Q9Y217 621 aa19.36■□□□□ 0.69
CHMP2A-208ENST00000601220 NUP210Q8TEM1 1887 aaPredicted RBP19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 PRPF40AO75400 957 aaKnown RBP19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 TADA3O75528 432 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 RETP07949 1114 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 CYP2F1P24903 491 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 DDX6P26196 483 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 TSPY1Q01534 308 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 ALCAMQ13740 583 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 TAF12Q16514 161 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 NFE2Q16621 373 aaPredicted RBP19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 DDR2Q16832 855 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 CCDC142Q17RM4 750 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 INTS6LQ5JSJ4 861 aaKnown RBP19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 PKN3Q6P5Z2 889 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 MON1AQ86VX9 555 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 TMEM86AQ8N2M4 240 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 CSGALNACT2Q8N6G5 542 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 CACTINQ8WUQ7 758 aaKnown RBP19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 PCIF1Q9H4Z3 704 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 PDE11AQ9HCR9 933 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 ABCB6Q9NP58 842 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 PANK4Q9NVE7 773 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 DDX43Q9NXZ2 648 aaKnown RBP19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 ITGA11Q9UKX5 1188 aa19.35■□□□□ 0.69
CHMP2A-208ENST00000601220 HCRTO43612 131 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 NOL4O94818 638 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 PRPF6O94906 941 aaKnown RBP19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 IDEP14735 1019 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 SDHBP21912 280 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 ACAT1P24752 427 aaKnown RBP19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 CNR2P34972 360 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 HOXD13P35453 343 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 TXLNAP40222 546 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 SPEM2Q0P670 501 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 RUNX3Q13761 415 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 SIM2Q14190 667 aaPredicted RBP19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 SOWAHAQ2M3V2 549 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 TMEM196Q5HYL7 178 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 TRIM68Q6AZZ1 485 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 FSTL4Q6MZW2 842 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 GLIS3Q8NEA6 775 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 SPATA18Q8TC71 538 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 MYRFLQ96LU7 910 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 TDP1Q9NUW8 608 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 GTF3C4Q9UKN8 822 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 USP18Q9UMW8 372 aa19.34■□□□□ 0.69
CHMP2A-208ENST00000601220 PTPRJQ12913 1337 aa19.33■□□□□ 0.69
CHMP2A-208ENST00000601220 TRDMT1O14717 391 aaKnown RBP19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 HUS1O60921 280 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 CSH1P0DML2 217 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 CSH2P0DML3 217 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 AVPR1AP37288 418 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 STAT6P42226 847 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 NASPP49321 788 aaPredicted RBP19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 RBP5P82980 135 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 BFSP1Q12934 665 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 ZNF268Q14587 947 aaPredicted RBP19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 FAM171BQ6P995 826 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 PRR23BQ6ZRT6 265 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 SYCP3Q8IZU3 236 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 TOP6BLQ8N6T0 577 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 TRMT2BQ96GJ1 504 aaKnown RBP19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 INTS4Q96HW7 963 aaKnown RBP19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 MTMR12Q9C0I1 747 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 EBF3Q9H4W6 596 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 TMEM206Q9H813 350 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 FBRSL1Q9HCM7 1045 aaKnown RBP19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 RAB23Q9ULC3 237 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms