RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	MAEL	Q96JY0	434 aa	Known RBP	11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	RPS6KC1	Q96S38	1066 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	NOD2	Q9HC29	1040 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PCDHA10	Q9Y5I2	948 aa		11.92	□□□□□ -0.5
SUPT5H-216	ENST00000599335	HTR3E	A5X5Y0	456 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	JAK3	P52333	1124 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZNF554	Q86TJ5	538 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	IFT20	Q8IY31	132 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SLC35B4	Q969S0	331 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TRIM31	Q9BZY9	425 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	OSGEP	Q9NPF4	335 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	NFU1	Q9UMS0	254 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	EXOC7	Q9UPT5	735 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DHX15	O43143	795 aa	Known RBP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCNE2	O96020	404 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	KRT5	P13647	590 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MUT	P22033	750 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CTGF	P29279	349 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	GBP1	P32455	592 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MAPK7	Q13164	816 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TUBA3C	Q13748	450 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PDE1C	Q14123	709 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	BTG3	Q14201	252 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	C7orf57	Q8NEG2	295 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCHCR1	Q8TD31	782 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	POP1	Q99575	1024 aa	Known RBP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZBED2	Q9BTP6	218 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SIX2	Q9NPC8	291 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZNF302	Q9NR11	478 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SFMBT1	Q9UHJ3	866 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	AMFR	Q9UKV5	643 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SPTLC1	O15269	473 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SGTA	O43765	313 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	S100B	P04271	92 aa	Predicted RBP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PRLR	P16471	622 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PIK3CA	P42336	1068 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PDE1B	Q01064	536 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CBWD2	Q8IUF1	395 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ARRDC4	Q8NCT1	418 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	TMEM143	Q96AN5	459 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ARL8A	Q96BM9	186 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	EURL	Q9NYK6	297 aa		11.91	□□□□□ -0.5
SUPT5H-216	ENST00000599335	KRIT1	O00522	736 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MTA2	O94776	668 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	CCDC166	P0CW27	439 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	UBA1	P22314	1058 aa	Known RBP	11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	VPS41	P49754	854 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	BLVRA	P53004	296 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ACTR2	P61160	394 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	LLGL1	Q15334	1064 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MMGT1	Q8N4V1	131 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SLC7A3	Q8WY07	619 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SEPT1	Q8WYJ6	367 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	IFT74	Q96LB3	600 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	FERD3L	Q96RJ6	166 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	FIZ1	Q96SL8	496 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	HSF2BP	O75031	334 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	LINGO3	P0C6S8	592 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	RAG1	P15918	1043 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SFN	P31947	248 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PPP3CA	Q08209	521 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	SUZ12	Q15022	739 aa	Known RBP	11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	MEI1	Q5TIA1	1274 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PHLDB2	Q86SQ0	1253 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	VSIG10L	Q86VR7	867 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	RHPN2	Q8IUC4	686 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	REM2	Q8IYK8	340 aa	Predicted RBP	11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	C7orf61	Q8IZ16	206 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	FUK	Q8N0W3	1084 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	ZFPM2	Q8WW38	1151 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	PALMD	Q9NP74	551 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	RNF19A	Q9NV58	838 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335	DOCK3	Q8IZD9	2030 aa		11.9	□□□□□ -0.5
SUPT5H-216	ENST00000599335		H3BRB1	525 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	SNX2	O60749	519 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	FARP2	O94887	1054 aa	Predicted RBP	11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	TSPY1	Q01534	308 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	MOGS	Q13724	837 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	KCNA10	Q16322	511 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	FAM160B1	Q5W0V3	765 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	PHLDB3	Q6NSJ2	640 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	GATAD2A	Q86YP4	633 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	KAT5	Q92993	513 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	FAM84A	Q96KN4	292 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	PLVAP	Q9BX97	442 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	TUT1	Q9H6E5	874 aa	Known RBP	11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	GTF3C4	Q9UKN8	822 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	UBE4B	O95155	1302 aa		11.9	□□□□□ -0.51
SUPT5H-216	ENST00000599335	GTPBP10	A4D1E9	387 aa	Known RBP	11.89	□□□□□ -0.51
SUPT5H-216	ENST00000599335	HGS	O14964	777 aa	Predicted RBP	11.89	□□□□□ -0.51
SUPT5H-216	ENST00000599335	CNMD	O75829	334 aa		11.89	□□□□□ -0.51
SUPT5H-216	ENST00000599335	PSAP	P07602	524 aa		11.89	□□□□□ -0.51
SUPT5H-216	ENST00000599335	THPO	P40225	353 aa		11.89	□□□□□ -0.51
SUPT5H-216	ENST00000599335	MRPS35	P82673	323 aa	Known RBP	11.89	□□□□□ -0.51
SUPT5H-216	ENST00000599335	SYCE1	Q8N0S2	351 aa		11.89	□□□□□ -0.51
SUPT5H-216	ENST00000599335	TPCN2	Q8NHX9	752 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms