RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 POLR2BP30876 1174 aaKnown RBP11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 HOXA6P31267 233 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 HOXD13P35453 343 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 MCM2P49736 904 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 ARHGAP8P85298 464 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 LRRC32Q14392 662 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 ITPRIPL2Q3MIP1 535 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 ARHGAP15Q53QZ3 475 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 TMEM196Q5HYL7 178 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 L1TD1Q5T7N2 865 aaKnown RBP11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 LONP2Q86WA8 852 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 METTL23Q86XA0 190 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 BRSK2Q8IWQ3 736 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 THEM5Q8N1Q8 247 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 FAM160A2Q8N612 972 aaPredicted RBP11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 SPPL2BQ8TCT7 592 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 PCIF1Q9H4Z3 704 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 GMEB2Q9UKD1 530 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 GTF3C4Q9UKN8 822 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 DSEQ9UL01 958 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 CHD6Q8TD26 2715 aa11.88□□□□□ -0.51
GRAMD1A-209ENST00000598580 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 FRMD3A2A2Y4 597 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 TRDMT1O14717 391 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 BMP15O95972 392 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 EGFP01133 1207 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 ITGB3P05106 788 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 LMO2P25791 158 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 CDC25CP30307 473 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 GALK1P51570 392 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 ZXDBP98169 803 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 TFAMQ00059 246 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 RUNX3Q13761 415 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 CCDC6Q16204 474 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 SOWAHAQ2M3V2 549 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 LMBRD2Q68DH5 695 aaPredicted RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 MON1AQ86VX9 555 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 WDR5BQ86VZ2 330 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 OR5B17Q8NGF7 314 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 RASSF8Q8NHQ8 419 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 C2orf15Q8WU43 125 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 MSANTD3Q96H12 275 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 RTKNQ9BST9 563 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 MRPL44Q9H9J2 332 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 NME7Q9Y5B8 376 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 PCDHB5Q9Y5E4 795 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 ATG2BQ96BY7 2078 aa11.87□□□□□ -0.51
GRAMD1A-209ENST00000598580 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 GABRDO14764 452 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SLC30A4O14863 429 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 KRT37O76014 449 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 NOL4O94818 638 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 PRPF6O94906 941 aaKnown RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 IL18RAPO95256 599 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SYT1P21579 422 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SMARCB1Q12824 385 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 VEPH1Q14D04 833 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 POSTNQ15063 836 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SF3A2Q15428 464 aaKnown RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 CSRP2Q16527 193 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SV2CQ496J9 727 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 RRAGBQ5VZM2 374 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 C1orf228Q6PIY5 440 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 PRR23CQ6ZRP0 262 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 KBTBD6Q86V97 674 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 DCP1BQ8IZD4 617 aaKnown RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SYNPOQ8N3V7 929 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 CSGALNACT2Q8N6G5 542 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 KBTBD7Q8WVZ9 684 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SECISBP2LQ93073 1101 aaKnown RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 HVCN1Q96D96 273 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 MYRFLQ96LU7 910 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 ACCSQ96QU6 501 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 USP28Q96RU2 1077 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 ACBD6Q9BR61 282 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 LINC00597Q9H2U6 94 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 SMOC1Q9H4F8 434 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 TDP1Q9NUW8 608 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 GDAP2Q9NXN4 497 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 DDX43Q9NXZ2 648 aaKnown RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 GCNT4Q9P109 453 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 STK17AQ9UEE5 414 aa11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 MAGED2Q9UNF1 606 aaPredicted RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
GRAMD1A-209ENST00000598580 C2orf78A6NCI8 922 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 TULP1O00294 542 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 TM4SF5O14894 197 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 AXIN1O15169 862 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 LRP3O75074 770 aa11.85□□□□□ -0.51
GRAMD1A-209ENST00000598580 GCNT3O95395 438 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms