RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TMCO5BA8MYB1 307 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 LPXNO60711 386 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 DGKIO75912 1065 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 CALCAP01258 141 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 PDGFRBP09619 1106 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 IL9P15248 144 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 WARSP23381 471 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 TAP1Q03518 808 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 DSC1Q08554 894 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 REXO1L1PQ8IX06 675 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 ADGRF2Q8IZF7 708 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 WHAMMQ8TF30 809 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 DDX1Q92499 740 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 PPP1R13BQ96KQ4 1090 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 TMEM175Q9BSA9 504 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 SYT11Q9BT88 431 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 REXO2Q9Y3B8 237 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 SCN1AP35498 2009 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 TDRD15B5MCY1 1934 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 SPTBN4Q9H254 2564 aa13.89□□□□□ -0.19
SHKBP1-209ENST00000595803 TTC3P53804 2025 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 USP27XA6NNY8 438 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 NRP1O14786 923 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 ZNF263O14978 683 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 TRAPPC3O43617 180 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 RTN2O75298 545 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 H2AFZP0C0S5 128 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 ODC1P11926 461 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 IGFBP6P24592 240 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 BRD2P25440 801 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 BRCC3P46736 316 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 LHX1P48742 406 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 VAV2P52735 878 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 WDR5P61964 334 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 FMO1Q01740 532 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 PAN2Q504Q3 1202 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 ARHGAP29Q52LW3 1261 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 WSCD1Q658N2 575 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 ACAD10Q6JQN1 1059 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 FAM117BQ6P1L5 589 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 CD300LGQ6UXG3 332 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 TRIM72Q6ZMU5 477 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 H2AFVQ71UI9 128 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 LIMS2Q7Z4I7 341 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 SPRED2Q7Z698 418 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 TMEM86AQ8N2M4 240 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 LRRC43Q8N309 656 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 C3orf58Q8NDZ4 430 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 PRSS33Q8NF86 280 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 TWNKQ96RR1 684 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 PCDHB18PQ96TA0 734 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 TSGA10Q9BZW7 698 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 LZTFL1Q9NQ48 299 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 DSEQ9UL01 958 aa13.88□□□□□ -0.19
SHKBP1-209ENST00000595803 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 KRT86O43790 486 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 FTLP02792 175 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 GZMAP12544 262 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 AARSP49588 968 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 ORC1Q13415 861 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 CNGA2Q16280 664 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 SGO2Q562F6 1265 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 PPP1R2P3Q6NXS1 205 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 ZNF662Q6ZS27 426 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 CRYBG2Q8N1P7 616 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 THEM5Q8N1Q8 247 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 HASPINQ8TF76 798 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 GDPD5Q8WTR4 605 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 KBTBD7Q8WVZ9 684 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 TFAP2BQ92481 460 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 DNAJB4Q9UDY4 337 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 HMGXB4Q9UGU5 601 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 INTUQ9ULD6 942 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 PCDHB8Q9UN66 801 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 PRG3Q9Y2Y8 225 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 CEP83Q9Y592 693 aa13.87□□□□□ -0.19
SHKBP1-209ENST00000595803 I3L4J1 428 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 M0QZQ0 153 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 KIF4AO95239 1232 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 GALTP07902 379 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 KCNA5P22460 613 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 LMO2P25791 158 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 SLC11A1P49279 550 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 DEFB103AP81534 67 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 STILQ15468 1287 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 CLEC16AQ2KHT3 1053 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 OSTM1Q86WC4 334 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms