RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 GET4Q7L5D6 327 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 MYLPFQ96A32 169 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 ARID3AQ99856 593 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 BCO2Q9BYV7 579 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 IMPG2Q9BZV3 1241 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 DNAJC25Q9H1X3 360 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 CDH9Q9ULB4 789 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 PCDHB5Q9Y5E4 795 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 A8MXQ7 604 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 LOC730098B7Z3J9 87 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 FGFR1OPO95684 399 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 POU2F2P09086 479 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 CCDC192P0DO97 292 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 HAPLN1P10915 354 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 P4HA1P13674 534 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 ATF6P18850 670 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 CD58P19256 250 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 CYP2F1P24903 491 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 KCNH2Q12809 1159 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 LRMPQ12912 555 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 STX1AQ16623 288 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 SLC5A9Q2M3M2 681 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 SDHAF4Q5VUM1 108 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 FAM171BQ6P995 826 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 CYP26C1Q6V0L0 522 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 RTL10Q7L3V2 364 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 GJD3Q8N144 294 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 ITFG1Q8TB96 612 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 GPR152Q8TDT2 470 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 KHSRPQ92945 711 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 TWNKQ96RR1 684 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 MYADMQ96S97 322 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 CORO1BQ9BR76 489 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 NIF3L1Q9GZT8 377 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 SAMSN1Q9NSI8 373 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 MAFFQ9ULX9 164 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 COQ4Q9Y3A0 265 aa14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 NUP210Q8TEM1 1887 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-207ENST00000595631 AFPP02771 609 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 RHOP08100 348 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 PTPN1P18031 435 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 FSHRP23945 695 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 NDST1P52848 882 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 CYP27A1Q02318 531 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 TYRO3Q06418 890 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 NFE2Q16621 373 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 KLHL40Q2TBA0 621 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 PABPC1LQ4VXU2 614 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 ACOT1Q86TX2 421 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 SPATA2LQ8IUW3 424 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 B3GALNT2Q8NCR0 500 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 CCDC150Q8NCX0 1101 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 ST13P5Q8NFI4 369 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 SPPL2BQ8TCT7 592 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 GIPC2Q8TF65 315 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 C2orf15Q8WU43 125 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 ING5Q8WYH8 240 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 TCEAL4Q96EI5 215 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 PCED1BQ96HM7 432 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 THAP9Q9H5L6 903 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 ANO10Q9NW15 660 aa14.71□□□□□ -0.05
SHKBP1-207ENST00000595631 CLDN5O00501 218 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 FAM163BP0C2L3 166 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 PTPN2P17706 415 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 GBP2P32456 591 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 CCR2P41597 374 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 MTIF2P46199 727 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 ALDH1A3P47895 512 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 EPHB3P54753 998 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 POTEHQ6S545 545 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 ELMOD1Q8N336 334 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 TDRD5Q8NAT2 981 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 MYCBPAPQ8TBZ2 947 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 FAM200AQ8TCP9 573 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 B3GNT5Q9BYG0 378 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 ZNF334Q9HCZ1 680 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 NR2E1Q9Y466 385 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 VCANP13611 3396 aa14.7□□□□□ -0.06
SHKBP1-207ENST00000595631 HELZP42694 1942 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 DLL1O00548 723 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 MYL4P12829 197 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 CCDC130P13994 396 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 GJA1P17302 382 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 CEBPBP17676 345 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 BDNFP23560 247 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 TUFMP49411 452 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 CACNA2D1P54289 1103 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 INCA1Q0VD86 236 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 SMARCB1Q12824 385 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 PLD1Q13393 1074 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 MTMR3Q13615 1198 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 DDR2Q16832 855 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 WDR44Q5JSH3 913 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 PRSS36Q5K4E3 855 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 DNAJB7Q7Z6W7 309 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 TMC8Q8IU68 726 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 RNF135Q8IUD6 432 aa14.69□□□□□ -0.06
SHKBP1-207ENST00000595631 SCN4BQ8IWT1 228 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms