RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 RTL10Q7L3V2 364 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 UNC93AQ86WB7 457 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 PPM1KQ8N3J5 372 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 TTC39CQ8N584 583 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 CMASQ8NFW8 434 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-221ENST00000593026 TNIP3Q96KP6 325 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 ARID3AQ99856 593 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 VPS16Q9H269 839 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 ADAM7Q9H2U9 754 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 DPEP3Q9H4B8 488 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 FAM124BQ9H5Z6 455 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-221ENST00000593026 CRTAC1Q9NQ79 661 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 LIMA1Q9UHB6 759 aaKnown RBP15.93■□□□□ 0.14
DDX39A-221ENST00000593026 PCDHB5Q9Y5E4 795 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 INSL5Q9Y5Q6 135 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 PRUNE2Q8WUY3 3088 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 MYBPHLA2RUH7 354 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 XYLBO75191 536 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 LRG1P02750 347 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 PTPN1P18031 435 aaKnown RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 TRIM21P19474 475 aaKnown RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 YWHAEP62258 255 aaKnown RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 TPM4P67936 248 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 MRPS5P82675 430 aaKnown RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 CCDC142Q17RM4 750 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 PUS10Q3MIT2 529 aaKnown RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 MDH1BQ5I0G3 518 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 TJAP1Q5JTD0 557 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 PTCRAQ6ISU1 281 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 FAM171BQ6P995 826 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 TRIM65Q6PJ69 517 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 C4orf50Q6ZRC1 276 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 LUZP1Q86V48 1076 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 SPATA2LQ8IUW3 424 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 TTC9BQ8N6N2 239 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 B3GALNT2Q8NCR0 500 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 SMG7Q92540 1137 aaKnown RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 SEPT5Q99719 369 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 PRKD2Q9BZL6 878 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 DNAI2Q9GZS0 605 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 CRISPLD1Q9H336 500 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 TSPY26PQ9H489 355 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 CISHQ9NSE2 258 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 HSFX1Q9UBD0 423 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 HMGXB4Q9UGU5 601 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 SLC27A5Q9Y2P5 690 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 USP15Q9Y4E8 981 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-221ENST00000593026 YIPF1Q9Y548 306 aa15.92■□□□□ 0.14
DDX39A-221ENST00000593026 GRXCR2A6NFK2 248 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 CCL16O15467 120 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 MBTPS2O43462 519 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 CILPO75339 1184 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 ATP1A3P13637 1013 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 SLC9A1P19634 815 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 KCNQ1P51787 676 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 COPB1P53618 953 aaKnown RBP15.91■□□□□ 0.14
DDX39A-221ENST00000593026 CYP27A1Q02318 531 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 GCNT1Q02742 428 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 ORC1Q13415 861 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 MGAT5BQ3V5L5 792 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 CYP26C1Q6V0L0 522 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 GPR149Q86SP6 731 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 ACOT1Q86TX2 421 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 ARHGEF19Q8IW93 802 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 MYCBPAPQ8TBZ2 947 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 FAM200AQ8TCP9 573 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 MYLPFQ96A32 169 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 ZNF707Q96C28 371 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-221ENST00000593026 FUBP3Q96I24 572 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX39A-221ENST00000593026 RIPOR3Q96MK2 946 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 NT5C1AQ9BXI3 368 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 PIDD1Q9HB75 910 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 ABCB6Q9NP58 842 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 FAM50BQ9Y247 325 aa15.91■□□□□ 0.14
DDX39A-221ENST00000593026 LRRC10BA6NIK2 292 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 GOLGA6L19H0YKK7 550 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 SOAT2O75908 522 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 PAPLNO95428 1278 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 PON1P27169 355 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 MTHFRP42898 656 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 ALDH1A3P47895 512 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 TUFMP49411 452 aaKnown RBP15.9■□□□□ 0.14
DDX39A-221ENST00000593026 TWF1Q12792 350 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 PLD1Q13393 1074 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 CBX2Q14781 532 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-221ENST00000593026 CFAP221Q4G0U5 840 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 ZNF394Q53GI3 561 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 ATAT1Q5SQI0 421 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 FKBP15Q5T1M5 1219 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 PHLDB3Q6NSJ2 640 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 RRAGAQ7L523 313 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 CRYBG2Q8N1P7 616 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 FEZF2Q8TBJ5 459 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 WHAMMQ8TF30 809 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 PCED1BQ96HM7 432 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 ASB2Q96Q27 587 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 TWNKQ96RR1 684 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 LPIN3Q9BQK8 851 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 RHOBTB2Q9BYZ6 727 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms