RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 PTPRDP23468 1912 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
VMP1-211ENST00000591315 TACC1O75410 805 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 POU2F2P09086 479 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 MYL4P12829 197 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 PTPN2P17706 415 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 ASPAP45381 313 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 MXI1P50539 228 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 CACNA2D1P54289 1103 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 MTMR3Q13615 1198 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 DDR2Q16832 855 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 MDH1BQ5I0G3 518 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 PRSS36Q5K4E3 855 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 DPH6Q7L8W6 267 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 OTOP3Q7RTS5 596 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 DNAJB7Q7Z6W7 309 aaPredicted RBP12.32□□□□□ -0.44
VMP1-211ENST00000591315 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 TMC8Q8IU68 726 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 GPIHBP1Q8IV16 184 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 DCP1BQ8IZD4 617 aaKnown RBP12.32□□□□□ -0.44
VMP1-211ENST00000591315 ZDHHC14Q8IZN3 488 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 TRIML1Q8N9V2 468 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 FGF13Q92913 245 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 TATDN2Q93075 761 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 SLC35C1Q96A29 364 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 MYLPFQ96A32 169 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 MCRS1Q96EZ8 462 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 ZSWIM3Q96MP5 696 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 TWNKQ96RR1 684 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
VMP1-211ENST00000591315 SNX25Q9H3E2 840 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 C11orf16Q9NQ32 467 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 TMEM30AQ9NV96 361 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 ARMCX3Q9UH62 379 aaPredicted RBP12.32□□□□□ -0.44
VMP1-211ENST00000591315 USTQ9Y2C2 406 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
VMP1-211ENST00000591315 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
VMP1-211ENST00000591315 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 CLDN5O00501 218 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 DCXO43602 365 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 LAMP2P13473 410 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
VMP1-211ENST00000591315 PCSK1P29120 753 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 ALDH1A3P47895 512 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 EPHB3P54753 998 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 NLRP12P59046 1061 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
VMP1-211ENST00000591315 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 STXBP5Q5T5C0 1151 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 KRT39Q6A163 491 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 RTL10Q7L3V2 364 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 FRMD5Q7Z6J6 570 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 IRF2BP1Q8IU81 584 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 NPAS3Q8IXF0 933 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 SHKBP1Q8TBC3 707 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 ACSF2Q96CM8 615 aaPredicted RBP12.31□□□□□ -0.44
VMP1-211ENST00000591315 ZNF512Q96ME7 567 aaPredicted RBP12.31□□□□□ -0.44
VMP1-211ENST00000591315 ARID3AQ99856 593 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 B3GNT5Q9BYG0 378 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 CDH9Q9ULB4 789 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 MAFFQ9ULX9 164 aa12.31□□□□□ -0.44
VMP1-211ENST00000591315 BICDL2A1A5D9 508 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 A8MXQ7 604 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 NARSO43776 548 aaKnown RBP12.3□□□□□ -0.44
VMP1-211ENST00000591315 CD58P19256 250 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 BDNFP23560 247 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 GTF2H1P32780 548 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 PPP1R2P41236 205 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 EPHA5P54756 1037 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 CYP27A1Q02318 531 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 ENPEPQ07075 957 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 LRMPQ12912 555 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 TEAD2Q15562 447 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 NFE2Q16621 373 aaPredicted RBP12.3□□□□□ -0.44
VMP1-211ENST00000591315 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 HSP90AA4PQ58FG1 418 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 PARM1Q6UWI2 310 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 GAREM2Q75VX8 874 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 ACOT1Q86TX2 421 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 SPATA2LQ8IUW3 424 aaPredicted RBP12.3□□□□□ -0.44
VMP1-211ENST00000591315 SCN4BQ8IWT1 228 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 MLKLQ8NB16 471 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 SPPL2BQ8TCT7 592 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 FGF14Q92915 247 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 PCED1BQ96HM7 432 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 BCO2Q9BYV7 579 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 IL21Q9HBE4 155 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 RAB20Q9NX57 234 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 EPS15L1Q9UBC2 864 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 RWDD2AQ9UIY3 292 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 CDH7Q9ULB5 785 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 GREB1Q4ZG55 1949 aa12.3□□□□□ -0.44
VMP1-211ENST00000591315 MYH10P35580 1976 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms