RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TBC1D17Q9HA65 648 aa23■■□□□ 1.27
R3HDM4-206ENST00000590454 CBX8Q9HC52 389 aa23■■□□□ 1.27
R3HDM4-206ENST00000590454 EPS15L1Q9UBC2 864 aa23■■□□□ 1.27
R3HDM4-206ENST00000590454 MTRRQ9UBK8 725 aa23■■□□□ 1.27
R3HDM4-206ENST00000590454 NXF1Q9UBU9 619 aaKnown RBP23■■□□□ 1.27
R3HDM4-206ENST00000590454 CA14Q9ULX7 337 aa23■■□□□ 1.27
R3HDM4-206ENST00000590454 GVINP1Q7Z2Y8 2422 aa23■■□□□ 1.27
R3HDM4-206ENST00000590454 VPS13AQ96RL7 3174 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 HCRTO43612 131 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 TBC1D4O60343 1298 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 AFPP02771 609 aaKnown RBP22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 CYP11A1P05108 521 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 SRFP11831 508 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 TYMPP19971 482 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 PAX3P23760 479 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 ATICP31939 592 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 MYL7Q01449 175 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 SGSM1Q2NKQ1 1148 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 MIIPQ5JXC2 388 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 FAM114A1Q8IWE2 563 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 FBXL13Q8NEE6 735 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 HINFPQ9BQA5 517 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 SDCBP2Q9H190 292 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 SMYD3Q9H7B4 428 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 VRTNQ9H8Y1 702 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 RAB20Q9NX57 234 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 MAGEC2Q9UBF1 373 aaPredicted RBP22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 FBXL5Q9UKA1 691 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 COQ4Q9Y3A0 265 aa22.99■■□□□ 1.27
R3HDM4-206ENST00000590454 OAZ2O95190 189 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 ADH1AP07327 375 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 ZNF18P17022 549 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 RAP1GAPP47736 663 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 YWHAHQ04917 246 aaPredicted RBP22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 CTXN3Q4LDR2 81 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 OVOS1Q6IE37 1185 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 PHLDB3Q6NSJ2 640 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 SCARA5Q6ZMJ2 495 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 ANKS3Q6ZW76 656 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 GPR65Q8IYL9 337 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 KBTBD7Q8WVZ9 684 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 TMEM209Q96SK2 561 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 MMS19Q96T76 1030 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 MRPL45Q9BRJ2 306 aaKnown RBP22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 TUBGCP2Q9BSJ2 902 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 TAB2Q9NYJ8 693 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 NME7Q9Y5B8 376 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 CDY1Q9Y6F8 540 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 CLUHO75153 1309 aa22.98■■□□□ 1.27
R3HDM4-206ENST00000590454 HUS1O60921 280 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 CLSTN1O94985 981 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 OR4Q2P0C623 313 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 ATP1A3P13637 1013 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 OR1D2P34982 312 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 CDR1P51861 262 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 CDH8P55286 799 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 MAN2A1Q16706 1144 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 LRSAM1Q6UWE0 723 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 LUZP1Q86V48 1076 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 PALB2Q86YC2 1186 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 TOP6BLQ8N6T0 577 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 OR10T2Q8NGX3 314 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 LMO3Q8TAP4 145 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 RUBCNQ92622 972 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 TATDN2Q93075 761 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 FNIP2Q9P278 1114 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 SIT1Q9Y3P8 196 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 BACE2Q9Y5Z0 518 aa22.97■■□□□ 1.27
R3HDM4-206ENST00000590454 PMM2O15305 246 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 GLUD1P00367 558 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 DCNP07585 359 aaKnown RBP22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 SPATA31D3P0C874 917 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 SP9P0CG40 484 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 EEF1GP26641 437 aaKnown RBP22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 ARPP19P56211 112 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 TNNC1P63316 161 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 NOP14P78316 857 aaKnown RBP22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 KRT31Q15323 416 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 ZNF667Q5HYK9 610 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 SPATA31D4Q6ZUB0 917 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 ADGRF2Q8IZF7 708 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 TAF4BQ92750 862 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 MYADMQ96S97 322 aa22.96■■□□□ 1.27
R3HDM4-206ENST00000590454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.96■■□□□ 1.274e-7■■□□□ 11.8
R3HDM4-206ENST00000590454 H7C4K7 107 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 PRKCSHP14314 528 aaPredicted RBP22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 LMO2P25791 158 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 ASPAP45381 313 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 LRMPQ12912 555 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 CCDC142Q17RM4 750 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 VWA3BQ502W6 1294 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 ZNF280DQ6N043 979 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 PDXDC1Q6P996 788 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 METTL23Q86XA0 190 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 C1orf210Q8IVY1 113 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 GPR152Q8TDT2 470 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 HDAC7Q8WUI4 952 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 SMG7Q92540 1137 aaKnown RBP22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 CRACR2AQ9BSW2 395 aa22.95■■□□□ 1.26
R3HDM4-206ENST00000590454 NDST4Q9H3R1 872 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms