RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 MYLK2Q9H1R3 596 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 PHTF1Q9UMS5 762 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 ALOX15BO15296 676 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 PRPF4O43172 522 aaKnown RBP eCLIP21.95■■□□□ 1.1
ZNF554-203ENST00000590116 ITGAVP06756 1048 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 SRGAP2CP0DJJ0 459 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 CA4P22748 312 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 TFAMQ00059 246 aaKnown RBP21.95■■□□□ 1.1
ZNF554-203ENST00000590116 MYO1EQ12965 1108 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 PPP1R15BQ5SWA1 713 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 DENND1BQ6P3S1 775 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 CATSPERGQ6ZRH7 1159 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 JOSD2Q8TAC2 188 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 PRPF31Q8WWY3 499 aaKnown RBP21.95■■□□□ 1.1
ZNF554-203ENST00000590116 PCDH9Q9HC56 1237 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 AGTPBP1Q9UPW5 1226 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 SHOC2Q9UQ13 582 aa21.95■■□□□ 1.1
ZNF554-203ENST00000590116 SPDYE16A6NNV3 312 aaPredicted RBP21.94■■□□□ 1.1
ZNF554-203ENST00000590116 ATP2A1O14983 1001 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 FGFR1P11362 822 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 IL1R2P27930 398 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 RFC1P35251 1148 aaPredicted RBP21.94■■□□□ 1.1
ZNF554-203ENST00000590116 NRLP54845 237 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 GPX6P59796 221 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 MSS51Q4VC12 460 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 C12orf42Q96LP6 360 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 MAK16Q9BXY0 300 aaKnown RBP21.94■■□□□ 1.1
ZNF554-203ENST00000590116 C12orf65Q9H3J6 166 aaKnown RBP21.94■■□□□ 1.1
ZNF554-203ENST00000590116 DDX56Q9NY93 547 aaKnown RBP21.94■■□□□ 1.1
ZNF554-203ENST00000590116 POLIQ9UNA4 740 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 CD48P09326 243 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 SSTR1P30872 391 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 ELF1P32519 619 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 RFC5P40937 340 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 CCDC142Q17RM4 750 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 ZNF772Q68DY9 489 aaPredicted RBP21.94■■□□□ 1.1
ZNF554-203ENST00000590116 EMC1Q8N766 993 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 ERP27Q96DN0 273 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 TMEM237Q96Q45 408 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 CYTH4Q9UIA0 394 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 STARD13Q9Y3M8 1113 aa21.94■■□□□ 1.1
ZNF554-203ENST00000590116 CLUHO75153 1309 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 ALADP13716 330 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 CCNB1P14635 433 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 PSMA2P25787 234 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 PTPN7P35236 360 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 MSH2P43246 934 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 OTUD4Q01804 1114 aaKnown RBP21.93■■□□□ 1.1
ZNF554-203ENST00000590116 TRPC3Q13507 836 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 HIF1AQ16665 826 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 PTPN20Q4JDL3 420 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 FNBP1LQ5T0N5 605 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 RPAINQ86UA6 219 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 TRIM50Q86XT4 487 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 KIRREL3Q8IZU9 778 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 LRRC71Q8N4P6 559 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 ARFGAP1Q8N6T3 406 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 FBF1Q8TES7 1133 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 NXF1Q9UBU9 619 aaKnown RBP21.93■■□□□ 1.1
ZNF554-203ENST00000590116 SMG5Q9UPR3 1016 aaKnown RBP21.93■■□□□ 1.1
ZNF554-203ENST00000590116 AFG3L2Q9Y4W6 797 aa21.93■■□□□ 1.1
ZNF554-203ENST00000590116 C3orf70A6NLC5 250 aaPredicted RBP21.92■■□□□ 1.1
ZNF554-203ENST00000590116 MAGEB2O15479 319 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 UNC5CO95185 931 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 ICAM3P32942 547 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 CTCFP49711 727 aaPredicted RBP21.92■■□□□ 1.1
ZNF554-203ENST00000590116 AP3M2P53677 418 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 TFDP1Q14186 410 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 ZPBP2Q6X784 338 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 KIAA0319LQ8IZA0 1049 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 CEP120Q8N960 986 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 SLC35B2Q8TB61 432 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 ACTL9Q8TC94 416 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 WDR83Q9BRX9 315 aaKnown RBP21.92■■□□□ 1.1
ZNF554-203ENST00000590116 ETNK1Q9HBU6 452 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 CEP83Q9Y592 693 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 IGKV6D-21A0A0A0MT36 114 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 TCRBV7S3A2A0A539 114 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 MSCO60682 206 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 TOM1L1O75674 476 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 CD19P15391 556 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 TARSP26639 723 aaKnown RBP21.92■■□□□ 1.1
ZNF554-203ENST00000590116 TAP1Q03518 808 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 CCDC15Q0P6D6 951 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 TARBP2Q15633 366 aaKnown RBP21.92■■□□□ 1.1
ZNF554-203ENST00000590116 DUOXA2Q1HG44 320 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 SGSM1Q2NKQ1 1148 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 SYCP2LQ5T4T6 812 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 ZBTB10Q96DT7 871 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 MRPL4Q9BYD3 311 aaKnown RBP21.92■■□□□ 1.1
ZNF554-203ENST00000590116 ZNF518BQ9C0D4 1074 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 NRBP2Q9NSY0 501 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 SENP1Q9P0U3 644 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 PSMC3IPQ9P2W1 217 aaPredicted RBP21.92■■□□□ 1.1
ZNF554-203ENST00000590116 ZNF112Q9UJU3 913 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 CHKBQ9Y259 395 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 MGAMO43451 1857 aa21.92■■□□□ 1.1
ZNF554-203ENST00000590116 FARP2O94887 1054 aaPredicted RBP21.91■■□□□ 1.1
ZNF554-203ENST00000590116 GJB1P08034 283 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms