RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
TOMM40-204ENST00000589253 DERAQ9Y315 318 aa12.55□□□□□ -0.4
TOMM40-204ENST00000589253 LRRIQ3A6PVS8 624 aaPredicted RBP12.54□□□□□ -0.4
TOMM40-204ENST00000589253 TMEM189-UBE2V1I3L0A0 370 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 PODXLO00592 558 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 MAPK13O15264 365 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 RHOP08100 348 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 CYP3A5P20815 502 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 KCNA4P22459 653 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 CCR3P51677 355 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
TOMM40-204ENST00000589253 CLDN10P78369 228 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
TOMM40-204ENST00000589253 TYRO3Q06418 890 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 LPAL2Q16609 132 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
TOMM40-204ENST00000589253 IRF7Q92985 503 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 CCDC127Q96BQ5 260 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 MKNK1Q9BUB5 465 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 ZFP14Q9HCL3 533 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 SLC38A7Q9NVC3 462 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 INTS13Q9NVM9 706 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 RWDD2AQ9UIY3 292 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 CDY1Q9Y6F8 540 aa12.54□□□□□ -0.4
TOMM40-204ENST00000589253 KMT2BQ9UMN6 2715 aaPredicted RBP12.54□□□□□ -0.4
TOMM40-204ENST00000589253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 BICDL2A1A5D9 508 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 SYCE3A1L190 88 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 PRRG1O14668 218 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 ZNF197O14709 1029 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 SLC30A4O14863 429 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 CETN3O15182 167 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 SLC16A3O15427 465 aaKnown RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 ADAM12O43184 909 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 FOXD2O60548 495 aaPredicted RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 RETP07949 1114 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 TRIM49P0CI25 452 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 TRIM49CP0CI26 452 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 DLATP10515 647 aaKnown RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 PTPN2P17706 415 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 BRCC3P46736 316 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 TFAMQ00059 246 aaKnown RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 BFSP1Q12934 665 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 STX1AQ16623 288 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 C9orf57Q5W0N0 161 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 NT5DC4Q86YG4 428 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 IRF2BP1Q8IU81 584 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 FAM186BQ8IYM0 893 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 ELMOD1Q8N336 334 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 SYAP1Q96A49 352 aaPredicted RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 CEP63Q96MT8 703 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 UROC1Q96N76 676 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 TSPAN18Q96SJ8 248 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 TRMT61BQ9BVS5 477 aaKnown RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 CHRDQ9H2X0 955 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
TOMM40-204ENST00000589253 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
TOMM40-204ENST00000589253 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.4
TOMM40-204ENST00000589253 I3L4J1 428 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 PIRO00625 290 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 B3GAT3O94766 335 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 CEBPBP17676 345 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 ERCC5P28715 1186 aaPredicted RBP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 RPL9P32969 192 aaKnown RBP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 PSMC2P35998 433 aaKnown RBP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 VAMP7P51809 220 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 DMWDQ09019 674 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 SIM2Q14190 667 aaPredicted RBP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 GRM2Q14416 872 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 SURF1Q15526 300 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 CSGALNACT2Q8N6G5 542 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 BEST2Q8NFU1 509 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 FAM3CQ92520 227 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 CORO1BQ9BR76 489 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 PLA2G2FQ9BZM2 168 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 DNAJC25Q9H1X3 360 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.41
TOMM40-204ENST00000589253 DPP3Q9NY33 737 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.41
TOMM40-204ENST00000589253 GREB1Q4ZG55 1949 aa12.51□□□□□ -0.41
TOMM40-204ENST00000589253 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
TOMM40-204ENST00000589253 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
TOMM40-204ENST00000589253 VNN1O95497 513 aa12.51□□□□□ -0.41
TOMM40-204ENST00000589253 C4BPAP04003 597 aaKnown RBP12.51□□□□□ -0.41
TOMM40-204ENST00000589253 ITGB3P05106 788 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms