RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 VRTNQ9H8Y1 702 aa10.36□□□□□ -0.75
APOC1-204ENST00000589078 TMEM8AQ9HCN3 771 aa10.36□□□□□ -0.75
APOC1-204ENST00000589078 DDX43Q9NXZ2 648 aaKnown RBP10.36□□□□□ -0.75
APOC1-204ENST00000589078 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
APOC1-204ENST00000589078 RWDD2AQ9UIY3 292 aa10.36□□□□□ -0.75
APOC1-204ENST00000589078 L1RE1Q9UN81 338 aa10.36□□□□□ -0.75
APOC1-204ENST00000589078 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
APOC1-204ENST00000589078 CHD8Q9HCK8 2581 aa10.36□□□□□ -0.75
APOC1-204ENST00000589078 CST3P01034 146 aaPredicted RBP10.35□□□□□ -0.75
APOC1-204ENST00000589078 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 ALDH1A3P47895 512 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 GCLMP48507 274 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 TUFMP49411 452 aaKnown RBP10.35□□□□□ -0.75
APOC1-204ENST00000589078 MYL6P60660 151 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 DLG4P78352 724 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 MAPRE1Q15691 268 aaKnown RBP10.35□□□□□ -0.75
APOC1-204ENST00000589078 TPD52L1Q16890 204 aaPredicted RBP10.35□□□□□ -0.75
APOC1-204ENST00000589078 SLC39A12Q504Y0 691 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 CT47A1Q5JQC4 288 aaPredicted RBP10.35□□□□□ -0.75
APOC1-204ENST00000589078 CCDC183Q5T5S1 534 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 KRT39Q6A163 491 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 IQCEQ6IPM2 695 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 OTOP3Q7RTS5 596 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 FEZF2Q8TBJ5 459 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 GPT2Q8TD30 523 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 ACSF2Q96CM8 615 aaPredicted RBP10.35□□□□□ -0.75
APOC1-204ENST00000589078 RTP3Q9BQQ7 232 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 ZCWPW1Q9H0M4 648 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 MMRN2Q9H8L6 949 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 HSFX1Q9UBD0 423 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 FBXL21Q9UKT6 434 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 USTQ9Y2C2 406 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 INSL5Q9Y5Q6 135 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 R4GN57 208 aa10.35□□□□□ -0.75
APOC1-204ENST00000589078 TPRP12270 2363 aaKnown RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 CCL16O15467 120 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 N4BP1O75113 896 aaKnown RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 TACC1O75410 805 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 PAPLNO95428 1278 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 HLA-DRAP01903 254 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 OR4Q2P0C623 313 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 CCDC192P0DO97 292 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 WARSP23381 471 aaKnown RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 ERCC5P28715 1186 aaPredicted RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 GNL1P36915 607 aaPredicted RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 EPHB3P54753 998 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 STX17P56962 302 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 NLRP12P59046 1061 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 TDGQ13569 410 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 PUM1Q14671 1186 aaKnown RBP eCLIP10.34□□□□□ -0.75
APOC1-204ENST00000589078 VEPH1Q14D04 833 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 SOWAHAQ2M3V2 549 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 WDR44Q5JSH3 913 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 SASS6Q6UVJ0 657 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 RNF19BQ6ZMZ0 732 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 C4orf50Q6ZRC1 276 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 OR6B3Q8NGW1 331 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 OR10T2Q8NGX3 314 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 SPPL2BQ8TCT7 592 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 ZNF707Q96C28 371 aaPredicted RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 CNTNAP3BQ96NU0 1288 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 PGLYRP2Q96PD5 576 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 DUSP9Q99956 384 aaKnown RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 HINFPQ9BQA5 517 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 CNTNAP3Q9BZ76 1288 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 XYLT2Q9H1B5 865 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 SEMA4AQ9H3S1 761 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 WDR6Q9NNW5 1121 aaKnown RBP10.34□□□□□ -0.75
APOC1-204ENST00000589078 CDH9Q9ULB4 789 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 PCDHB5Q9Y5E4 795 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 FANCMQ8IYD8 2048 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 USP24Q9UPU5 2620 aa10.34□□□□□ -0.75
APOC1-204ENST00000589078 CLUHO75153 1309 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 MTMR11A4FU01 709 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 GABRDO14764 452 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 VNN1O95497 513 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 ASS1P00966 412 aaKnown RBP10.33□□□□□ -0.76
APOC1-204ENST00000589078 FSHRP23945 695 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 MCCD1P59942 119 aaPredicted RBP10.33□□□□□ -0.76
APOC1-204ENST00000589078 NOP14P78316 857 aaKnown RBP10.33□□□□□ -0.76
APOC1-204ENST00000589078 PPP3CAQ08209 521 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 TWF1Q12792 350 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 DUSP4Q13115 394 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 MGAT5BQ3V5L5 792 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 PABPC1LQ4VXU2 614 aaKnown RBP10.33□□□□□ -0.76
APOC1-204ENST00000589078 INTS6LQ5JSJ4 861 aaKnown RBP10.33□□□□□ -0.76
APOC1-204ENST00000589078 C1orf220Q5T0J3 134 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 LIMS2Q7Z4I7 341 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 ITIH5Q86UX2 942 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 SPATA2LQ8IUW3 424 aaPredicted RBP10.33□□□□□ -0.76
APOC1-204ENST00000589078 FAM114A1Q8IWE2 563 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 TTC39CQ8N584 583 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 ATAD1Q8NBU5 361 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 LEMD2Q8NC56 503 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 FBXL13Q8NEE6 735 aa10.33□□□□□ -0.76
APOC1-204ENST00000589078 TAS1R2Q8TE23 839 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms