RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CELF5Q8N6W0 485 aaKnown RBP14.76□□□□□ -0.05
HDAC5-208ENST00000588419 SLC46A2Q9BY10 475 aa14.76□□□□□ -0.05
HDAC5-208ENST00000588419 C2orf42Q9NWW7 574 aa14.76□□□□□ -0.05
HDAC5-208ENST00000588419 DDX43Q9NXZ2 648 aaKnown RBP14.76□□□□□ -0.05
HDAC5-208ENST00000588419 OBP2AQ9NY56 170 aa14.76□□□□□ -0.05
HDAC5-208ENST00000588419 SEL1LQ9UBV2 794 aa14.76□□□□□ -0.05
HDAC5-208ENST00000588419 CCL26Q9Y258 94 aa14.76□□□□□ -0.05
HDAC5-208ENST00000588419 STYXL1Q9Y6J8 313 aa14.76□□□□□ -0.05
HDAC5-208ENST00000588419 MYH10P35580 1976 aa14.76□□□□□ -0.05
HDAC5-208ENST00000588419 DCDC2BA2VCK2 349 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 HUS1O60921 280 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 PPP1R37O75864 691 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 TMEM191BP0C7N4 346 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 PDCP20941 246 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 PNPLA4P41247 253 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 ATXN1P54253 815 aaKnown RBP14.75□□□□□ -0.05
HDAC5-208ENST00000588419 RESTQ13127 1097 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 CCDC142Q17RM4 750 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 TXNDC8Q6A555 127 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 LONP2Q86WA8 852 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 CMTM8Q8IZV2 173 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 PDCL2Q8N4E4 241 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 CSGALNACT2Q8N6G5 542 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 PDILTQ8N807 584 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 C1orf127Q8N9H9 656 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 MRPS31Q92665 395 aaKnown RBP14.75□□□□□ -0.05
HDAC5-208ENST00000588419 FGFBP2Q9BYJ0 223 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 MTMR12Q9C0I1 747 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 EBF3Q9H4W6 596 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 GKN1Q9NS71 199 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 L1RE1Q9UN81 338 aa14.75□□□□□ -0.05
HDAC5-208ENST00000588419 R3HCC1Q9Y3T6 440 aaKnown RBP14.75□□□□□ -0.05
HDAC5-208ENST00000588419 PRR5-ARHGAP8B1AHC4 643 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 K7ESF4 209 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 HRO43593 1189 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 HCRTO43612 131 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 PRPF6O94906 941 aaKnown RBP14.74□□□□□ -0.05
HDAC5-208ENST00000588419 SDHBP21912 280 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 PXNP49023 591 aaPredicted RBP14.74□□□□□ -0.05
HDAC5-208ENST00000588419 MLLT6P55198 1093 aaPredicted RBP14.74□□□□□ -0.05
HDAC5-208ENST00000588419 NLRP12P59046 1061 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 ARHGAP8P85298 464 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 MYL7Q01449 175 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 SMARCB1Q12824 385 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 DDR2Q16832 855 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 SCARA3Q6AZY7 606 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 CC2D1AQ6P1N0 951 aaPredicted RBP14.74□□□□□ -0.05
HDAC5-208ENST00000588419 CCDC73Q6ZRK6 1079 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 NT5DC4Q86YG4 428 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 SCN4BQ8IWT1 228 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 CACTINQ8WUQ7 758 aaKnown RBP14.74□□□□□ -0.05
HDAC5-208ENST00000588419 DNAJC19Q96DA6 116 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 CBWD1Q9BRT8 395 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 PDE11AQ9HCR9 933 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 PANK4Q9NVE7 773 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
HDAC5-208ENST00000588419 SNX9Q9Y5X1 595 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 WDR87Q6ZQQ6 2873 aa14.74□□□□□ -0.05
HDAC5-208ENST00000588419 CACNA1AO00555 2505 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 SDK1Q7Z5N4 2213 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.73□□□□□ -0.05
HDAC5-208ENST00000588419 LDHAP00338 332 aaKnown RBP14.73□□□□□ -0.05
HDAC5-208ENST00000588419 CSH1P0DML2 217 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 CSH2P0DML3 217 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 ARSAP15289 507 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 CYP2F1P24903 491 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 CCINQ13939 588 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 NFE2Q16621 373 aaPredicted RBP14.73□□□□□ -0.05
HDAC5-208ENST00000588419 INTS6LQ5JSJ4 861 aaKnown RBP14.73□□□□□ -0.05
HDAC5-208ENST00000588419 PKN3Q6P5Z2 889 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 TMEM150AQ86TG1 271 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 OSTM1Q86WC4 334 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 SPATA2LQ8IUW3 424 aaPredicted RBP14.73□□□□□ -0.05
HDAC5-208ENST00000588419 ADGRF2Q8IZF7 708 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 USP13Q92995 863 aaPredicted RBP14.73□□□□□ -0.05
HDAC5-208ENST00000588419 ANKRD36BP1Q96IX9 119 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 HPS4Q9NQG7 708 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 GTF3C4Q9UKN8 822 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 PCDHB13Q9Y5F0 798 aa14.73□□□□□ -0.05
HDAC5-208ENST00000588419 A0A087X0B3 334 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 EXTL3O43909 919 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 F11P03951 625 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 RETP07949 1114 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 CCDC192P0DO97 292 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 HMGA1P17096 107 aaKnown RBP14.72□□□□□ -0.05
HDAC5-208ENST00000588419 SYT1P21579 422 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 GARTP22102 1010 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 TGM1P22735 817 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 DDX6P26196 483 aaKnown RBP eCLIP14.72□□□□□ -0.05
HDAC5-208ENST00000588419 PSMC1P62191 440 aaKnown RBP14.72□□□□□ -0.05
HDAC5-208ENST00000588419 RPL10AP62906 217 aaKnown RBP14.72□□□□□ -0.05
HDAC5-208ENST00000588419 GRSF1Q12849 480 aaKnown RBP eCLIP14.72□□□□□ -0.05
HDAC5-208ENST00000588419 CUL4AQ13619 759 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 RUNX3Q13761 415 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 CCDC6Q16204 474 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 MAMSTRQ6ZN01 415 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 PRR23CQ6ZRP0 262 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 GPD1LQ8N335 351 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 RIN3Q8TB24 985 aa14.72□□□□□ -0.05
HDAC5-208ENST00000588419 USP28Q96RU2 1077 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms