RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 KMT2EQ8IZD2 1858 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 TMEM221A6NGB7 291 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 M0R296 226 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 VNN1O95497 513 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 FAM163BP0C2L3 166 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 TRIM21P19474 475 aaKnown RBP17.22■□□□□ 0.35
ATG4D-205ENST00000586477 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
ATG4D-205ENST00000586477 MRE11P49959 708 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 LILRA4P59901 499 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 MYL6P60660 151 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 YWHAEP62258 255 aaKnown RBP17.22■□□□□ 0.35
ATG4D-205ENST00000586477 NOP14P78316 857 aaKnown RBP17.22■□□□□ 0.35
ATG4D-205ENST00000586477 NR1I3Q14994 352 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 PDXDC1Q6P996 788 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 TRIM65Q6PJ69 517 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 CYP26C1Q6V0L0 522 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 FMNL3Q8IVF7 1028 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 CXorf38Q8TB03 319 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 SPATA18Q8TC71 538 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 JAKMIP2Q96AA8 810 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 PBXIP1Q96AQ6 731 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 MYADMQ96S97 322 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 NUP58Q9BVL2 599 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 INTS2Q9H0H0 1204 aaKnown RBP17.22■□□□□ 0.35
ATG4D-205ENST00000586477 KCNH6Q9H252 994 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 GRPEL1Q9HAV7 217 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 PLCB1Q9NQ66 1216 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 DPP7Q9UHL4 492 aa17.22■□□□□ 0.35
ATG4D-205ENST00000586477 HUS1O60921 280 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 CST3P01034 146 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-205ENST00000586477 ODC1P11926 461 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 AARSP49588 968 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATG4D-205ENST00000586477 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 SLC8B1Q6J4K2 584 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 ANKS3Q6ZW76 656 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 BMP8AQ7Z5Y6 402 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 TOP6BLQ8N6T0 577 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 XPO4Q9C0E2 1151 aaKnown RBP17.21■□□□□ 0.35
ATG4D-205ENST00000586477 NIF3L1Q9GZT8 377 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 APEX2Q9UBZ4 518 aa17.21■□□□□ 0.35
ATG4D-205ENST00000586477 WDR27A2RRH5 827 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 M0QZQ0 153 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 SYN3O14994 580 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 ABLIM3O94929 683 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 C8AP07357 584 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 TPM1P09493 284 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 PON1P27169 355 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 NTHL1P78549 312 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 ROR1Q01973 937 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 GCNT1Q02742 428 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 SIGLEC14Q08ET2 396 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 TRIM14Q14142 442 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 SYCP1Q15431 976 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 METTL23Q86XA0 190 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 TMEM86AQ8N2M4 240 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 NEK11Q8NG66 645 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 SLC7A14Q8TBB6 771 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 MRFAP1L1Q96HT8 127 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-205ENST00000586477 CRACR2AQ9BSW2 395 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 OXCT2Q9BYC2 517 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-205ENST00000586477 XYLT2Q9H1B5 865 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 CYP3A43Q9HB55 503 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 PCDHB8Q9UN66 801 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATG4D-205ENST00000586477 PIEZO1Q92508 2521 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 ITIH6Q6UXX5 1313 aa17.2■□□□□ 0.34
ATG4D-205ENST00000586477 SPTLC1O15269 473 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 CCL16O15467 120 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 SEC24AO95486 1093 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 VNN2O95498 520 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 PDGFBP01127 241 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-205ENST00000586477 HOXA9P31269 272 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 MFAP3P55082 362 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 SCARA3Q6AZY7 606 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 ELMSAN1Q6PJG2 1045 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 OTOP3Q7RTS5 596 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 SUGP1Q8IWZ8 645 aaKnown RBP17.19■□□□□ 0.34
ATG4D-205ENST00000586477 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 PPM1KQ8N3J5 372 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 LMO3Q8TAP4 145 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 SEMA4DQ92854 862 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 MMS19Q96T76 1030 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 NXF1Q9UBU9 619 aaKnown RBP17.19■□□□□ 0.34
ATG4D-205ENST00000586477 SORCS3Q9UPU3 1222 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 SNX9Q9Y5X1 595 aa17.19■□□□□ 0.34
ATG4D-205ENST00000586477 GOLGA6L6A8MZA4 724 aa17.18■□□□□ 0.34
ATG4D-205ENST00000586477 HNRNPA1P09651 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
ATG4D-205ENST00000586477 TYMPP19971 482 aa17.18■□□□□ 0.34
ATG4D-205ENST00000586477 FIGNQ5HY92 759 aa17.18■□□□□ 0.34
ATG4D-205ENST00000586477 PPM1LQ5SGD2 360 aa17.18■□□□□ 0.34
ATG4D-205ENST00000586477 LIN9Q5TKA1 542 aa17.18■□□□□ 0.34
ATG4D-205ENST00000586477 SPECC1LQ69YQ0 1117 aa17.18■□□□□ 0.34
ATG4D-205ENST00000586477 POTEHQ6S545 545 aa17.18■□□□□ 0.34
ATG4D-205ENST00000586477 GRASPQ7Z6J2 395 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms