RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 YIPF1Q9Y548 306 aa22.9■■□□□ 1.26
RETREG3-202ENST00000585726 PMM2O15305 246 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 XYLBO75191 536 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 PTPN1P18031 435 aaKnown RBP22.89■■□□□ 1.25
RETREG3-202ENST00000585726 SP100P23497 879 aaPredicted RBP22.89■■□□□ 1.25
RETREG3-202ENST00000585726 HOXA9P31269 272 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 NDST1P52848 882 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 CYP27A1Q02318 531 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 SMARCB1Q12824 385 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 TCP11X2Q5H9J9 407 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 GRASPQ7Z6J2 395 aaPredicted RBP22.89■■□□□ 1.25
RETREG3-202ENST00000585726 EHBP1Q8NDI1 1231 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 SPPL2BQ8TCT7 592 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 MYLPFQ96A32 169 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 PKMYT1Q99640 499 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 ARID3AQ99856 593 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 CRACR2AQ9BSW2 395 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 POMKQ9H5K3 350 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 CYP3A43Q9HB55 503 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 TAB2Q9NYJ8 693 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 HMGXB4Q9UGU5 601 aa22.89■■□□□ 1.25
RETREG3-202ENST00000585726 MTCL1Q9Y4B5 1905 aaKnown RBP22.88■■□□□ 1.25
RETREG3-202ENST00000585726 ALDH1A3P47895 512 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 NTHL1P78549 312 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 VWA3BQ502W6 1294 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 FAM171BQ6P995 826 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 RTL10Q7L3V2 364 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 ACOT1Q86TX2 421 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 B3GALNT2Q8NCR0 500 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 FAM200AQ8TCP9 573 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 C2orf15Q8WU43 125 aaKnown RBP22.88■■□□□ 1.25
RETREG3-202ENST00000585726 NECTIN4Q96NY8 510 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 NT5C1BQ96P26 610 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 RHOBTB2Q9BYZ6 727 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 INTS2Q9H0H0 1204 aaKnown RBP22.88■■□□□ 1.25
RETREG3-202ENST00000585726 HCFC1R1Q9NWW0 138 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 GCNT4Q9P109 453 aa22.88■■□□□ 1.25
RETREG3-202ENST00000585726 SPTBN5Q9NRC6 3674 aaKnown RBP22.88■■□□□ 1.25
RETREG3-202ENST00000585726 BRWD1Q9NSI6 2320 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 CYP2F1P24903 491 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 EEF1GP26641 437 aaKnown RBP22.87■■□□□ 1.25
RETREG3-202ENST00000585726 ZNF165P49910 485 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 MAPRE1Q15691 268 aaKnown RBP22.87■■□□□ 1.25
RETREG3-202ENST00000585726 ZNF394Q53GI3 561 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 CDKAL1Q5VV42 579 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 ELMOD1Q8N336 334 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 LMO3Q8TAP4 145 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 MYCBPAPQ8TBZ2 947 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 TNIP3Q96KP6 325 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 NDST4Q9H3R1 872 aa22.87■■□□□ 1.25
RETREG3-202ENST00000585726 HAPLN1P10915 354 aaPredicted RBP22.86■■□□□ 1.25
RETREG3-202ENST00000585726 CDK11BP21127 795 aaKnown RBP22.86■■□□□ 1.25
RETREG3-202ENST00000585726 TUFMP49411 452 aaKnown RBP22.86■■□□□ 1.25
RETREG3-202ENST00000585726 GPR15P49685 360 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 EPHB3P54753 998 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 PLD1Q13393 1074 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 CUL2Q13617 745 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 NCAPHQ15003 741 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 MIIPQ5JXC2 388 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 CYP26C1Q6V0L0 522 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 GBP6Q6ZN66 633 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 C4orf50Q6ZRC1 276 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 PPM1KQ8N3J5 372 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 GIPC2Q8TF65 315 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 PCED1BQ96HM7 432 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 RPGRIP1Q96KN7 1286 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 ZNF512Q96ME7 567 aaPredicted RBP22.86■■□□□ 1.25
RETREG3-202ENST00000585726 NECAB3Q96P71 396 aaPredicted RBP22.86■■□□□ 1.25
RETREG3-202ENST00000585726 TWNKQ96RR1 684 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 BPIFA3Q9BQP9 254 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 CORO1BQ9BR76 489 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 VPS16Q9H269 839 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 CISHQ9NSE2 258 aa22.86■■□□□ 1.25
RETREG3-202ENST00000585726 DNMT3BQ9UBC3 853 aaKnown RBP22.86■■□□□ 1.25
RETREG3-202ENST00000585726 BDNFP23560 247 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 INCA1Q0VD86 236 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 SDHAF4Q5VUM1 108 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 IQCEQ6IPM2 695 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 RRAGAQ7L523 313 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 UNC93AQ86WB7 457 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 ARHGEF19Q8IW93 802 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 SCN4BQ8IWT1 228 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 DHX40Q8IX18 779 aaKnown RBP22.85■■□□□ 1.25
RETREG3-202ENST00000585726 GPR152Q8TDT2 470 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 ADAMTS19Q8TE59 1207 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 FAXDC2Q96IV6 333 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 MED10Q9BTT4 135 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 PHF7Q9BWX1 381 aaPredicted RBP22.85■■□□□ 1.25
RETREG3-202ENST00000585726 WDR6Q9NNW5 1121 aaKnown RBP22.85■■□□□ 1.25
RETREG3-202ENST00000585726 CEP72Q9P209 647 aa22.85■■□□□ 1.25
RETREG3-202ENST00000585726 SMTNL1A8MU46 457 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 CLDN5O00501 218 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 CILPO75339 1184 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 TPM2P07951 284 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 PTPN2P17706 415 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 SLC9A1P19634 815 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 KRT31Q15323 416 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 DDR2Q16832 855 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 EXOC3L4Q17RC7 722 aa22.84■■□□□ 1.25
RETREG3-202ENST00000585726 HS6ST3Q8IZP7 471 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms