RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 MARCKSP29966 332 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-206ENST00000584112 LRPAP1P30533 357 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 HOXA6P31267 233 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 ELF1P32519 619 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 MAPK8P45983 427 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 ROR1Q01973 937 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 ZNF423Q2M1K9 1284 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 RRAGBQ5VZM2 374 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 TPGS2Q68CL5 300 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 TANGO2Q6ICL3 276 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 ZNF280DQ6N043 979 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 MAP4K3Q8IVH8 894 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 CD302Q8IX05 232 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 DNASE1L2Q92874 299 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 EPSTI1Q96J88 318 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 HAPLN2Q9GZV7 340 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 RPF1Q9H9Y2 349 aaKnown RBP12.07□□□□□ -0.48
CCDC47-206ENST00000584112 TUBGCP4Q9UGJ1 667 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 FBXO2Q9UK22 296 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-206ENST00000584112 PIAS3Q9Y6X2 628 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 MORC2Q9Y6X9 1032 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-206ENST00000584112 AHCTF1Q8WYP5 2266 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 THADAQ6YHU6 1953 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 ADAMTS9Q9P2N4 1935 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 A0A0B4J269 797 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 NRG2O14511 850 aaPredicted RBP12.06□□□□□ -0.48
CCDC47-206ENST00000584112 PRRG1O14668 218 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 ABLIM3O94929 683 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 LRG1P02750 347 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 ATF2P15336 505 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 PAX3P23760 479 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 TNFSF9P41273 254 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 RIPPLY3P57055 190 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 GTF2BQ00403 316 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
CCDC47-206ENST00000584112 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
CCDC47-206ENST00000584112 CTXN3Q4LDR2 81 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 PABPC1LQ4VXU2 614 aaKnown RBP12.06□□□□□ -0.48
CCDC47-206ENST00000584112 SLFN12LQ6IEE8 588 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 SV2BQ7L1I2 683 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 NPAS3Q8IXF0 933 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 DDX12PQ92771 950 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 HVCN1Q96D96 273 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 ARID3AQ99856 593 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 OXCT2Q9BYC2 517 aaPredicted RBP12.06□□□□□ -0.48
CCDC47-206ENST00000584112 SEMA4CQ9C0C4 833 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 ST6GALNAC4Q9H4F1 302 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 BRD9Q9H8M2 597 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 SEL1LQ9UBV2 794 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 DNMT3LQ9UJW3 386 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 FBXL5Q9UKA1 691 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 KCNH3Q9ULD8 1083 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 MAFFQ9ULX9 164 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 PCDHB8Q9UN66 801 aa12.06□□□□□ -0.48
CCDC47-206ENST00000584112 ARHGEF37A1IGU5 675 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 WDR27A2RRH5 827 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 LACTBL1A8MY62 500 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 M0QZQ0 153 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 STX6O43752 255 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 FAM189A1O60320 539 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 ECI2O75521 394 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 ADRB2P07550 413 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 KRT10P13645 584 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 GAP43P17677 238 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 NMT1P30419 496 aaKnown RBP12.05□□□□□ -0.48
CCDC47-206ENST00000584112 ARPP19P56211 112 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 CEBPZQ03701 1054 aaKnown RBP12.05□□□□□ -0.48
CCDC47-206ENST00000584112 SPAG1Q07617 926 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 ZBTB6Q15916 424 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 USP49Q70CQ1 688 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 DYMQ7RTS9 669 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 TCEAL8Q8IYN2 117 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 ELMOD1Q8N336 334 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 BEST2Q8NFU1 509 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 FCRL3Q96P31 734 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-206ENST00000584112 FIZ1Q96SL8 496 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 CYP4F11Q9HBI6 524 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 AVENQ9NQS1 362 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-206ENST00000584112 HCFC1R1Q9NWW0 138 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 DNMT3BQ9UBC3 853 aaKnown RBP12.05□□□□□ -0.48
CCDC47-206ENST00000584112 MTMR6Q9Y217 621 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 OBSL1O75147 1896 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 POLQO75417 2590 aa12.05□□□□□ -0.48
CCDC47-206ENST00000584112 MUC22E2RYF6 1773 aaPredicted RBP12.05□□□□□ -0.48
CCDC47-206ENST00000584112 KIF26AQ9ULI4 1882 aaPredicted RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 SLC28A2O43868 658 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 CPB1P15086 417 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 PTPN2P17706 415 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 STAT6P42226 847 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 CSRP3P50461 194 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 POU5F1Q01860 360 aaKnown RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 SEMA3BQ13214 749 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 SLC39A14Q15043 492 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 POSTNQ15063 836 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 ADALQ6DHV7 355 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 FAM173BQ6P4H8 233 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms