RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PREPLQ4J6C6 727 aaPredicted RBP12.06□□□□□ -0.48
CASC3-208ENST00000583649 SYCP2LQ5T4T6 812 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 PEAR1Q5VY43 1037 aaPredicted RBP12.06□□□□□ -0.48
CASC3-208ENST00000583649 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 MON1AQ86VX9 555 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 CATSPER3Q86XQ3 398 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 GALNT15Q8N3T1 639 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 FSIP1Q8NA03 581 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 ZNF274Q96GC6 653 aaPredicted RBP12.06□□□□□ -0.48
CASC3-208ENST00000583649 LPIN3Q9BQK8 851 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 ZDHHC5Q9C0B5 715 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 TMEM206Q9H813 350 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 TMEM74BQ9NUR3 256 aa12.06□□□□□ -0.48
CASC3-208ENST00000583649 KIAA1522Q9P206 1035 aaPredicted RBP12.06□□□□□ -0.48
CASC3-208ENST00000583649 EML5Q05BV3 1969 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 THADAQ6YHU6 1953 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 ASH1LQ9NR48 2969 aaKnown RBP12.05□□□□□ -0.48
CASC3-208ENST00000583649 A0A087WWV3 80 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 TRAV19A0A0A6YYK7 116 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 SOAT2O75908 522 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 LARGE1O95461 756 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 CKMP06732 381 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 CSH1P0DML2 217 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 CSH2P0DML3 217 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 ITPKAP23677 461 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 LRPAP1P30533 357 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 NLRP12P59046 1061 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 NOLC1Q14978 699 aaKnown RBP eCLIP12.05□□□□□ -0.48
CASC3-208ENST00000583649 SLC39A12Q504Y0 691 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 TOGARAM2Q6ZUX3 1019 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 TRMT11Q7Z4G4 463 aaKnown RBP12.05□□□□□ -0.48
CASC3-208ENST00000583649 NAXDQ8IW45 347 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 DCP1BQ8IZD4 617 aaKnown RBP12.05□□□□□ -0.48
CASC3-208ENST00000583649 CCDC33Q8N5R6 958 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
CASC3-208ENST00000583649 ENGASEQ8NFI3 743 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 GIPC2Q8TF65 315 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 RLN3Q8WXF3 142 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 PNMA5Q96PV4 448 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 FNBP1Q96RU3 617 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 IL21Q9HBE4 155 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 PTPRHQ9HD43 1115 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 KMT5AQ9NQR1 393 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 CCL26Q9Y258 94 aa12.05□□□□□ -0.48
CASC3-208ENST00000583649 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 A0A087WV48 116 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 A0A1W2PQD8 194 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 CLDN3O15551 220 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 SH3BP5O60239 455 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 TOM1L1O75674 476 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 VNN2O95498 520 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 EDN1P05305 212 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 SPATA31C1P0DKV0 1188 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 CD59P13987 128 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 RPA1P27694 616 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 AARSP49588 968 aaKnown RBP eCLIP12.04□□□□□ -0.48
CASC3-208ENST00000583649 PEX3P56589 373 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 FAM193AP78312 1265 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 NBR1Q14596 966 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 PLEKHG6Q3KR16 790 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 LRRC69Q6ZNQ3 347 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 SPATA18Q8TC71 538 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 HMGB4Q8WW32 186 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 TARS2Q9BW92 718 aaKnown RBP12.04□□□□□ -0.48
CASC3-208ENST00000583649 CAPN10Q9HC96 672 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 TUBGCP4Q9UGJ1 667 aa12.04□□□□□ -0.48
CASC3-208ENST00000583649 MAGED2Q9UNF1 606 aaPredicted RBP12.04□□□□□ -0.48
CASC3-208ENST00000583649 ATXN2Q99700 1313 aaKnown RBP12.04□□□□□ -0.48
CASC3-208ENST00000583649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.03□□□□□ -0.48
CASC3-208ENST00000583649 ATXN7O15265 892 aaPredicted RBP12.03□□□□□ -0.48
CASC3-208ENST00000583649 ZNF217O75362 1048 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 APODP05090 189 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 CLTAP09496 248 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 ATF6P18850 670 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 SMTNP53814 917 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 RPL10AP62906 217 aaKnown RBP12.03□□□□□ -0.48
CASC3-208ENST00000583649 ZNF33AQ06730 810 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 KCNB1Q14721 858 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 SLC10A6Q3KNW5 377 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 BMP2KLQ5H9B9 411 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 TXNDC8Q6A555 127 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 GLRX5Q86SX6 157 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 EFCAB13Q8IY85 973 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 RGL4Q8IZJ4 473 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 TTC9BQ8N6N2 239 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 PNPLA1Q8N8W4 532 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 SETD7Q8WTS6 366 aaKnown RBP12.03□□□□□ -0.48
CASC3-208ENST00000583649 AIFM3Q96NN9 605 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 CDC6Q99741 560 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 ZCWPW1Q9H0M4 648 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 TRPC7Q9HCX4 862 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 ABI2Q9NYB9 513 aaPredicted RBP12.03□□□□□ -0.48
CASC3-208ENST00000583649 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 CYP46A1Q9Y6A2 500 aa12.03□□□□□ -0.48
CASC3-208ENST00000583649 WNT6Q9Y6F9 365 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms