RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 LNX1Q8TBB1 728 aaPredicted RBP19.22■□□□□ 0.67
SNX11-212ENST00000583320 SLC7A14Q8TBB6 771 aa19.22■□□□□ 0.67
SNX11-212ENST00000583320 NETO1Q8TDF5 533 aa19.22■□□□□ 0.67
SNX11-212ENST00000583320 DNMT3BQ9UBC3 853 aaKnown RBP19.22■□□□□ 0.67
SNX11-212ENST00000583320 TNFSF13BQ9Y275 285 aa19.22■□□□□ 0.67
SNX11-212ENST00000583320 GIT1Q9Y2X7 761 aa19.22■□□□□ 0.67
SNX11-212ENST00000583320 GTPBP10A4D1E9 387 aaKnown RBP19.21■□□□□ 0.67
SNX11-212ENST00000583320 PES1O00541 588 aaKnown RBP19.21■□□□□ 0.67
SNX11-212ENST00000583320 B4GALT5O43286 388 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 KIF4AO95239 1232 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 AFPP02771 609 aaKnown RBP19.21■□□□□ 0.67
SNX11-212ENST00000583320 ARF4P18085 180 aaPredicted RBP19.21■□□□□ 0.67
SNX11-212ENST00000583320 PROZP22891 400 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 HOXA9P31269 272 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 KCNH2Q12809 1159 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 BFSP1Q12934 665 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 GRIK3Q13003 919 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 PRPF4BQ13523 1007 aaKnown RBP19.21■□□□□ 0.67
SNX11-212ENST00000583320 PSMD5Q16401 504 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 SLC5A9Q2M3M2 681 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 USP37Q86T82 979 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 TMC2Q8TDI7 906 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 PIK3R5Q8WYR1 880 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 SLC35C1Q96A29 364 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 TRIM44Q96DX7 344 aaPredicted RBP19.21■□□□□ 0.67
SNX11-212ENST00000583320 CCDC51Q96ER9 411 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 TTPALQ9BTX7 342 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 NUP58Q9BVL2 599 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 CXCL16Q9H2A7 254 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 PCIF1Q9H4Z3 704 aa19.21■□□□□ 0.67
SNX11-212ENST00000583320 SF3B1O75533 1304 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNX11-212ENST00000583320 SPEGQ15772 3267 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 NRG2O14511 850 aaPredicted RBP19.2■□□□□ 0.66
SNX11-212ENST00000583320 GDF9O60383 454 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 TADA2AO75478 443 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 EDN1P05305 212 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 AXLP30530 894 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 MCL1Q07820 350 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 ADCY1Q08828 1119 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 SNRNP35Q16560 246 aaKnown RBP19.2■□□□□ 0.66
SNX11-212ENST00000583320 PABPC1LQ4VXU2 614 aaKnown RBP19.2■□□□□ 0.66
SNX11-212ENST00000583320 FIGNQ5HY92 759 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 FAM171A1Q5VUB5 890 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 LAIR1Q6GTX8 287 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 ZNF852Q6ZMS4 543 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 CCDC186Q7Z3E2 898 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 CEP57Q86XR8 500 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 FAM126AQ9BYI3 521 aaPredicted RBP19.2■□□□□ 0.66
SNX11-212ENST00000583320 CHRDQ9H2X0 955 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 PTPRHQ9HD43 1115 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 AGO2Q9UKV8 859 aaKnown RBP19.2■□□□□ 0.66
SNX11-212ENST00000583320 NDRG2Q9UN36 371 aaKnown RBP19.2■□□□□ 0.66
SNX11-212ENST00000583320 IGF2RP11717 2491 aa19.2■□□□□ 0.66
SNX11-212ENST00000583320 CASTOR2A6NHX0 329 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 ZNF233A6NK53 670 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 PMM2O15305 246 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 CLDN3O15551 220 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 STX10O60499 249 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 XYLBO75191 536 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 ECI2O75521 394 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 NPTXRO95502 500 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 IGFBP6P24592 240 aaPredicted RBP19.19■□□□□ 0.66
SNX11-212ENST00000583320 VAMP7P51809 220 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 POU5F1Q01860 360 aaKnown RBP19.19■□□□□ 0.66
SNX11-212ENST00000583320 ATF7IP2Q5U623 682 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 TANGO2Q6ICL3 276 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 MPZL3Q6UWV2 235 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 MCRS1Q96EZ8 462 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 NELL2Q99435 816 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 MSTO1Q9BUK6 570 aa19.19■□□□□ 0.66
SNX11-212ENST00000583320 ABLIM1O14639 778 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 NCAM2O15394 837 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 P4HA2O15460 535 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 POU2F2P09086 479 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 TPM1P09493 284 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 CEBPBP17676 345 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 KCNA4P22459 653 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 FCARP24071 287 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 DMWDQ09019 674 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 SYCP1Q15431 976 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 KYAT1Q16773 422 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 DCAF17Q5H9S7 520 aaPredicted RBP19.18■□□□□ 0.66
SNX11-212ENST00000583320 PRR23BQ6ZRT6 265 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 TRIM6Q9C030 488 aaPredicted RBP19.18■□□□□ 0.66
SNX11-212ENST00000583320 SEMA4GQ9NTN9 838 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 SIK3Q9Y2K2 1263 aa19.18■□□□□ 0.66
SNX11-212ENST00000583320 OGTO15294 1046 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 ADRB2P07550 413 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 RETP07949 1114 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 GTF2H1P32780 548 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 CYP24A1Q07973 514 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 NCBP1Q09161 790 aaKnown RBP19.17■□□□□ 0.66
SNX11-212ENST00000583320 SRSF5Q13243 272 aaKnown RBP19.17■□□□□ 0.66
SNX11-212ENST00000583320 GRM2Q14416 872 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNX11-212ENST00000583320 TCERG1LQ5VWI1 586 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 PRR23CQ6ZRP0 262 aa19.17■□□□□ 0.66
SNX11-212ENST00000583320 APBB1IPQ7Z5R6 666 aaPredicted RBP19.17■□□□□ 0.66
SNX11-212ENST00000583320 CBWD2Q8IUF1 395 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms