RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 RNF40O75150 1001 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 RARGP13631 454 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 MMP8P22894 467 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 FDFT1P37268 417 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 PTK7Q13308 1070 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 FAM102AQ5T9C2 384 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 GRAMD1AQ96CP6 724 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 ARHGEF26Q96DR7 871 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 KREMEN1Q96MU8 473 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 LRRC1Q9BTT6 524 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 COLEC11Q9BWP8 271 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 IRX2Q9BZI1 471 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 PDZD7Q9H5P4 517 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 PCDH9Q9HC56 1237 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 NSMCE4AQ9NXX6 385 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 TXNDC16Q9P2K2 825 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 HDAC6Q9UBN7 1215 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 NENFQ9UMX5 172 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 GINS2Q9Y248 185 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 ADGRA2Q96PE1 1338 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 CYP2B6P20813 491 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 KPNA2P52292 529 aaKnown RBP10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 GJA9P57773 515 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 MORN1Q5T089 497 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 ATP11CQ8NB49 1132 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 ATP6V1G3Q96LB4 118 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 TLL2Q9Y6L7 1015 aa10.65□□□□□ -0.7
TRAPPC8-211ENST00000582539 PFDN6O15212 129 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 THP07101 528 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 GJC1P36383 396 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 CREMQ03060 361 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 ASPHQ12797 758 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 TAPT1Q6NXT6 567 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 LRRC39Q96DD0 335 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 SERPINB12Q96P63 405 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 TRIM10Q9UDY6 481 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 A0A0G2JMZ2 1700 aa10.65□□□□□ -0.71
TRAPPC8-211ENST00000582539 MYH9P35579 1960 aaKnown RBP10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 DPYSL4O14531 572 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 ABHD2P08910 425 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 FAM200BP0CF97 657 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 CDK16Q00536 496 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 ROR1Q01973 937 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 GJB7Q6PEY0 223 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 SLC47A2Q86VL8 602 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 CEP295NLQ96MC4 621 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 PSMB7Q99436 277 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 EPAS1Q99814 870 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 TUBB6Q9BUF5 446 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 RETREG1Q9H6L5 497 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 IPO11Q9UI26 975 aaKnown RBP10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 CDH9Q9ULB4 789 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 TSPAN1O60635 241 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZBED1O96006 694 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 NEFHP12036 1026 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 STX2P32856 288 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 INCA1Q0VD86 236 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 GRIK3Q13003 919 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 HSDL1Q3SXM5 330 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 MON1BQ7L1V2 547 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 SNX27Q96L92 541 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 TMEM109Q9BVC6 243 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 MRGBPQ9NV56 204 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 SSX2IPQ9Y2D8 614 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 RASGRF2O14827 1237 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 KRT14P02533 472 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 XRCC4Q13426 336 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 PALM2Q8IXS6 379 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 TATDN2Q93075 761 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 XAB2Q9HCS7 855 aaKnown RBP10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 CNTN3Q9P232 1028 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 BCCIPQ9P287 314 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 NFU1Q9UMS0 254 aa10.64□□□□□ -0.71
TRAPPC8-211ENST00000582539 IQANK1A0A1B0GTG1 560 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 H7C0C1 242 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 NCK2O43639 380 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 UNGP13051 313 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 WARSP23381 471 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ATP5OP48047 213 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SERPINB9P50453 376 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF132P52740 706 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 PDK1Q15118 436 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 FYB2Q5VWT5 728 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SCARA5Q6ZMJ2 495 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SEPT8Q92599 483 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 PCYT2Q99447 389 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ELOVL4Q9GZR5 314 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 OLA1Q9NTK5 396 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 FNIP2Q9P278 1114 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 TPX2Q9ULW0 747 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SMG5Q9UPR3 1016 aaKnown RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 SNX9Q9Y5X1 595 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 CLUHO75153 1309 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 GOLGA8SH3BPF8 625 aa10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 RNF225M0QZC1 329 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF263O14978 683 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms