RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CD58P19256 250 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 NRIP1P48552 1158 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 NAP1L1P55209 391 aaKnown RBP13.4□□□□□ -0.26
SRSF1-204ENST00000581979 CDR2Q01850 454 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 ZP2Q05996 745 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 SMAD4Q13485 552 aaKnown RBP13.4□□□□□ -0.26
SRSF1-204ENST00000581979 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 RNF169Q8NCN4 708 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 CXorf38Q8TB03 319 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 MICAL1Q8TDZ2 1067 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 HPDLQ96IR7 371 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 TSPAN18Q96SJ8 248 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-204ENST00000581979 TLE6Q9H808 572 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 PUF60Q9UHX1 559 aaKnown RBP13.4□□□□□ -0.26
SRSF1-204ENST00000581979 CD207Q9UJ71 328 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 C5orf42Q9H799 3197 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 GLP2RO95838 553 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 CHRNB2P17787 502 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 ASPAP45381 313 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 NDUFV1P49821 464 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 RAB27AP51159 221 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 TNNC1P63316 161 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 FMO1Q01740 532 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 RBM23Q86U06 439 aaKnown RBP13.39□□□□□ -0.27
SRSF1-204ENST00000581979 DNAAF5Q86Y56 855 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 ADHFE1Q8IWW8 467 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 UBR7Q8N806 425 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 C18orf25Q96B23 403 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-204ENST00000581979 FAXDC2Q96IV6 333 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 VRTNQ9H8Y1 702 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 CISHQ9NSE2 258 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 SPG21Q9NZD8 308 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 CNTN6Q9UQ52 1028 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 SMIM28A0A1B0GU29 152 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 TACC1O75410 805 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 MOCS3O95396 460 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
SRSF1-204ENST00000581979 CALCAP01258 141 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 KCNE1P15382 129 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 COL9A1P20849 921 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 GNA15P30679 374 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 KRT17Q04695 432 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 CLUL1Q15846 466 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 ZBTB6Q15916 424 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 DUSP6Q16828 381 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 XKR4Q5GH76 650 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 ZNF677Q86XU0 584 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 SLC39A11Q8N1S5 342 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 RNF10Q8N5U6 811 aaKnown RBP13.39□□□□□ -0.27
SRSF1-204ENST00000581979 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
SRSF1-204ENST00000581979 NGRNQ9NPE2 291 aaKnown RBP13.39□□□□□ -0.27
SRSF1-204ENST00000581979 CTAGE9A4FU28 777 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 CARNS1A5YM72 827 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 FANCGO15287 622 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 BUB1O43683 1085 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 URI1O94763 535 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-204ENST00000581979 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-204ENST00000581979 PBX3P40426 434 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 RAP1GAPP47736 663 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 GALCP54803 685 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 KCNC3Q14003 757 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 TMEM184AQ6ZMB5 413 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 PALB2Q86YC2 1186 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-204ENST00000581979 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
SRSF1-204ENST00000581979 NOX5Q96PH1 765 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 RPS6KC1Q96S38 1066 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 PCDHB18PQ96TA0 734 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 NAPGQ99747 312 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-204ENST00000581979 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 BCO2Q9BYV7 579 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 TAS2R14Q9NYV8 317 aa13.38□□□□□ -0.27
SRSF1-204ENST00000581979 FAM170AA1A519 330 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 BTNL10A8MVZ5 291 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 PER2O15055 1255 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 THAP12O43422 761 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 GPR37L1O60883 481 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 RTN2O75298 545 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 ABCB4P21439 1286 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 ALDH7A1P49419 539 aaKnown RBP13.37□□□□□ -0.27
SRSF1-204ENST00000581979 BCAR1P56945 870 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 ZNF394Q53GI3 561 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 C9orf57Q5W0N0 161 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 GLB1LQ6UWU2 654 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 MRPL10Q7Z7H8 261 aaKnown RBP13.37□□□□□ -0.27
SRSF1-204ENST00000581979 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 VN1R2Q8NFZ6 395 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 TRIM58Q8NG06 486 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 LPPQ93052 612 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms