RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 VPS52Q8N1B4 723 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 ZNF713Q8N859 430 aaPredicted RBP7.89□□□□□ -1.15
TVP23C-208ENST00000581273 ZBTB8BQ8NAP8 495 aaPredicted RBP7.89□□□□□ -1.15
TVP23C-208ENST00000581273 HERVK_113Q902F9 699 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 SLCO2A1Q92959 643 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 TTC25Q96NG3 672 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 BTBD10Q9BSF8 475 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 PHACTR1Q9C0D0 580 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 SPATC1LQ9H0A9 340 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 WNT8AQ9H1J5 351 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 MYLK2Q9H1R3 596 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 NKX2-4Q9H2Z4 354 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 EPB41L4BQ9H329 900 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 PCDH18Q9HCL0 1135 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 EPB41L4AQ9HCS5 686 aaPredicted RBP7.89□□□□□ -1.15
TVP23C-208ENST00000581273 SSU72Q9NP77 194 aaKnown RBP7.89□□□□□ -1.15
TVP23C-208ENST00000581273 HOXC10Q9NYD6 342 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 PLK2Q9NYY3 685 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 NKX1-2Q9UD57 310 aaPredicted RBP7.89□□□□□ -1.15
TVP23C-208ENST00000581273 ZNF510Q9Y2H8 683 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 SH3GLB1Q9Y371 365 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 TRIOO75962 3097 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 GPR179Q6PRD1 2367 aa7.89□□□□□ -1.15
TVP23C-208ENST00000581273 KDM3AQ9Y4C1 1321 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CACNA1HO95180 2353 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 MAGEB6P1A0A0J9YX57 407 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CCDC162PA2VCL2 907 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 SMIM23A6NLE4 172 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 SIGLEC16A6NMB1 481 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 EPHB6O15197 1021 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 GYG2O15488 501 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 PRPF4O43172 522 aaKnown RBP eCLIP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 MAGEC1O60732 1142 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CSDE1O75534 798 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ECEL1O95672 775 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 SHBGP04278 402 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ASLP04424 464 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 LYNP07948 512 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CLTBP09497 229 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 RARBP10826 455 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 PIM1P11309 404 aaPredicted RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ALAS1P13196 640 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 MUTP22033 750 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CTNNA2P26232 953 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CDC25CP30307 473 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 FPGSQ05932 587 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ASPHQ12797 758 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 TROAPQ12815 778 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 RASA2Q15283 850 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 RCN1Q15293 331 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 TRMT5Q32P41 509 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 KBTBD12Q3ZCT8 623 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 DNAL1Q4LDG9 190 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ZCWPW2Q504Y3 356 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 EARS2Q5JPH6 523 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 KRT79Q5XKE5 535 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 FAM91A1Q658Y4 838 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ADGRD1Q6QNK2 874 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 LBX2Q6XYB7 198 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ACAD11Q709F0 780 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CENPUQ71F23 418 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 EPM2AIP1Q7L775 607 aaPredicted RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ASCL5Q7RTU5 278 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 CLEC10AQ8IUN9 316 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 RELL1Q8IUW5 271 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ZC3H3Q8IXZ2 948 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ENAHQ8N8S7 591 aaPredicted RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ANKRD42Q8N9B4 389 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 FAM133AQ8N9E0 248 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 C12orf50Q8NA57 414 aaPredicted RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 SMYD1Q8NB12 490 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 KIAA0895Q8NCT3 520 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 FBXO25Q8TCJ0 367 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 DDI1Q8WTU0 396 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 NAT14Q8WUY8 206 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 WDR60Q8WVS4 1066 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 C17orf50Q8WW18 174 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 LARP4BQ92615 738 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 DGCR14Q96DF8 476 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 NSL1Q96IY1 281 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ZFRQ96KR1 1074 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 TRIM51Q9BSJ1 452 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 TRIM31Q9BZY9 425 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 GANQ9H2C0 597 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 ARHGEF10LQ9HCE6 1279 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 C6orf50Q9HD87 102 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 XPNPEP3Q9NQH7 507 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 TMEM39AQ9NV64 488 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 NDE1Q9NXR1 346 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 SEPT9Q9UHD8 586 aaPredicted RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 PACSIN2Q9UNF0 486 aaPredicted RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 MTO1Q9Y2Z2 717 aaKnown RBP7.88□□□□□ -1.15
TVP23C-208ENST00000581273 SNX24Q9Y343 169 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 TACC3Q9Y6A5 838 aa7.88□□□□□ -1.15
TVP23C-208ENST00000581273 PARP14Q460N5 1801 aa7.87□□□□□ -1.15
TVP23C-208ENST00000581273 ZNF236Q9UL36 1845 aa7.87□□□□□ -1.15
TVP23C-208ENST00000581273 RFXAPO00287 272 aa7.87□□□□□ -1.15
TVP23C-208ENST00000581273 DDX3XO00571 662 aaKnown RBP eCLIP7.87□□□□□ -1.15
TVP23C-208ENST00000581273 CAPN9O14815 690 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms