RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 SEPT11Q9NVA2 429 aaKnown RBP11.41□□□□□ -0.58
SS18-213ENST00000579640 ADAMTS1Q9UHI8 967 aa11.41□□□□□ -0.58
SS18-213ENST00000579640 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.41□□□□□ -0.58
SS18-213ENST00000579640 LZTS1Q9Y250 596 aa11.41□□□□□ -0.58
SS18-213ENST00000579640 SSX2IPQ9Y2D8 614 aa11.41□□□□□ -0.58
SS18-213ENST00000579640 CEP83Q9Y592 693 aa11.41□□□□□ -0.58
SS18-213ENST00000579640 C5orf67F2Z3F1 127 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 O00370 1275 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 DDX3XO00571 662 aaKnown RBP eCLIP11.4□□□□□ -0.581e-15■■■□□ 17.7
SS18-213ENST00000579640 GZMAP12544 262 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 ACAT1P24752 427 aaKnown RBP11.4□□□□□ -0.58
SS18-213ENST00000579640 CTNNB1P35222 781 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 GLUD2P49448 558 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 KRT83P78385 493 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 DSG1Q02413 1049 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 UBE3AQ05086 875 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 CTXN3Q4LDR2 81 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 RTP2Q5QGT7 225 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 FAM171BQ6P995 826 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 GLYCTKQ8IVS8 523 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 TDHQ8IZJ6 230 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 TXLNBQ8N3L3 684 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 LNX1Q8TBB1 728 aaPredicted RBP11.4□□□□□ -0.58
SS18-213ENST00000579640 MYCBPAPQ8TBZ2 947 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 CYFIP2Q96F07 1278 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 HNRNPABQ99729 332 aaKnown RBP11.4□□□□□ -0.58
SS18-213ENST00000579640 VN1R3Q9BXE9 311 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 ZNF518BQ9C0D4 1074 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 ZCWPW1Q9H0M4 648 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 LHX5Q9H2C1 402 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 MSRAQ9UJ68 235 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 BACE2Q9Y5Z0 518 aa11.4□□□□□ -0.58
SS18-213ENST00000579640 ATP8B3O60423 1300 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 A0A087X0T9 212 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 GRXCR1A8MXD5 290 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 HCRTO43612 131 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 TBC1D4O60343 1298 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 CALCAP01258 141 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 CYP1A1P04798 512 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 URODP06132 367 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 FAM228BP0C875 321 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 CDH5P33151 784 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 PSMC1P62191 440 aaKnown RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 CREMQ03060 361 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 GFPT1Q06210 699 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 SMARCB1Q12824 385 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 MTF1Q14872 753 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 MDH1BQ5I0G3 518 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 PPP1R26Q5T8A7 1209 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 ALKBH5Q6P6C2 394 aaKnown RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 C4orf50Q6ZRC1 276 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 TAS1R1Q7RTX1 841 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 C12orf29Q8N999 325 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 KLHL23Q8NBE8 558 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 TMEM35BQ8NCS4 154 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 OR10T2Q8NGX3 314 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 TGS1Q96RS0 853 aaKnown RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 PKMYT1Q99640 499 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 ZSWIM1Q9BR11 485 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.39□□□□□ -0.59
SS18-213ENST00000579640 MTRRQ9UBK8 725 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 HESX1Q9UBX0 185 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 NAGPAQ9UK23 515 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 TSPAN16Q9UKR8 245 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 NENFQ9UMX5 172 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 GBF1Q92538 1859 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 ATP2C2O75185 946 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 MICAL2O94851 1124 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 CA3P07451 260 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 CCDC175P0C221 793 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 SETSIPP0DME0 302 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 PSMD5Q16401 504 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 NFE2Q16621 373 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 CLEC16AQ2KHT3 1053 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 GOLGA7BQ2TAP0 167 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 CCDC122Q5T0U0 273 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 KIAA0319Q5VV43 1072 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 VPS52Q8N1B4 723 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 ANKRD52Q8NB46 1076 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 PCDHB18PQ96TA0 734 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 C11orf84Q9BUA3 381 aaPredicted RBP11.39□□□□□ -0.59
SS18-213ENST00000579640 FAM49BQ9NUQ9 324 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 SPTLC3Q9NUV7 552 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 ADGRG1Q9Y653 693 aa11.39□□□□□ -0.59
SS18-213ENST00000579640 MYBPHLA2RUH7 354 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 M0QYV0 167 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 CCP110O43303 1012 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 RTN2O75298 545 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 CTSAP10619 480 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 UNGP13051 313 aaPredicted RBP11.38□□□□□ -0.59
SS18-213ENST00000579640 MYOGP15173 224 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 MAGEA1P43355 309 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 BCAT1P54687 386 aa11.38□□□□□ -0.59
SS18-213ENST00000579640 SLC8A3P57103 927 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms