RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GTF2H1P32780 548 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 STARD6P59095 220 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 KCNMA1Q12791 1236 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 RAPGEF1Q13905 1077 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 CAPSQ13938 189 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 MEA1Q16626 185 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 SLC44A4Q53GD3 710 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
SS18-210ENST00000578700 PDXDC1Q6P996 788 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
SS18-210ENST00000578700 TOGARAM2Q6ZUX3 1019 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 VPS36Q86VN1 386 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 CDR2LQ86X02 465 aaPredicted RBP10.9□□□□□ -0.66
SS18-210ENST00000578700 MAML2Q8IZL2 1156 aaPredicted RBP10.9□□□□□ -0.66
SS18-210ENST00000578700 KIF18AQ8NI77 898 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 TMC2Q8TDI7 906 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 HASPINQ8TF76 798 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 HDAC7Q8WUI4 952 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 ZNF592Q92610 1267 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 FGF14Q92915 247 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 IKZF4Q9H2S9 585 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 NLRC4Q9NPP4 1024 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 SLC2A4RGQ9NR83 387 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 CHST7Q9NS84 486 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 DLL3Q9NYJ7 618 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 FBXL5Q9UKA1 691 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 EPN1Q9Y6I3 576 aaPredicted RBP10.9□□□□□ -0.66
SS18-210ENST00000578700 CFAP47Q6ZTR5 3102 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 PATJQ8NI35 1801 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 GOLGA8IPA6NC78 632 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 GOLGA8JA6NMD2 632 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 CCL16O15467 120 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 CLDN3O15551 220 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 AKR1B10O60218 316 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 KIF5CO60282 957 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 TSPAN1O60635 241 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 ZMYND10O75800 440 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 NDUFA10O95299 355 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 SERPING1P05155 500 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 PRKCBP05771 671 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 TRIM49P0CI25 452 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 TRIM49CP0CI26 452 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 PON1P27169 355 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 MXI1P50539 228 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 ATXN1P54253 815 aaKnown RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 POU5F1BQ06416 359 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 DSC1Q08554 894 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 MLF2Q15773 248 aaPredicted RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 ASIC2Q16515 512 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 PPM1LQ5SGD2 360 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 CDCA2Q69YH5 1023 aaPredicted RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 NOTUMQ6P988 496 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 LILRA6Q6PI73 481 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 TSSK4Q6SA08 328 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 RAD9BQ6WBX8 426 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 APBB1IPQ7Z5R6 666 aaPredicted RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 KIAA1328Q86T90 577 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 HACE1Q8IYU2 909 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 RNF168Q8IYW5 571 aaPredicted RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 EHBP1Q8NDI1 1231 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 SECISBP2LQ93073 1101 aaKnown RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 CCDC127Q96BQ5 260 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 SAAL1Q96ER3 474 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 PRIMPOLQ96LW4 560 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 FNBP1Q96RU3 617 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 KXD1Q9BQD3 176 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 FAM213AQ9BRX8 229 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 MSTO1Q9BUK6 570 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 NHEJ1Q9H9Q4 299 aaPredicted RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.89□□□□□ -0.67
SS18-210ENST00000578700 ANKFY1Q9P2R3 1169 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 ADAM28Q9UKQ2 775 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 AGO2Q9UKV8 859 aaKnown RBP10.89□□□□□ -0.67
SS18-210ENST00000578700 CDH7Q9ULB5 785 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 USP18Q9UMW8 372 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 GIT1Q9Y2X7 761 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 CHD6Q8TD26 2715 aa10.89□□□□□ -0.67
SS18-210ENST00000578700 DCDC2BA2VCK2 349 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 USP27XA6NNY8 438 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 EIF3CLB5ME19 914 aaKnown RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 TISP43B9A030 160 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 RNF225M0QZC1 329 aaPredicted RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 TOM1L1O75674 476 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 NPTXRO95502 500 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 UCHL3P15374 230 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 FERP16591 822 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 SLC9A1P19634 815 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 ANXA13P27216 316 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 ADSSP30520 456 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 AXLP30530 894 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 STAT1P42224 750 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 GCLMP48507 274 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 PRPF4BQ13523 1007 aaKnown RBP10.88□□□□□ -0.67
SS18-210ENST00000578700 SURF1Q15526 300 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 LIN9Q5TKA1 542 aa10.88□□□□□ -0.67
SS18-210ENST00000578700 KRT39Q6A163 491 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms