RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 KCNQ1P51787 676 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 EPHB3P54753 998 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 CBX2Q14781 532 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-208ENST00000578630 TAF12Q16514 161 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 VWA3BQ502W6 1294 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 HSP90AA4PQ58FG1 418 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 TCP11X2Q5H9J9 407 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 SUSD6Q92537 303 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 FUBP3Q96I24 572 aaKnown RBP eCLIP12.3□□□□□ -0.44
ERBB2-208ENST00000578630 FAM81BQ96LP2 452 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 BCO2Q9BYV7 579 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 NDST4Q9H3R1 872 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 ABCB6Q9NP58 842 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 ABI2Q9NYB9 513 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-208ENST00000578630 PRKAG3Q9UGI9 489 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 ASB3Q9Y575 518 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 INSL5Q9Y5Q6 135 aa12.3□□□□□ -0.44
ERBB2-208ENST00000578630 GTPBP10A4D1E9 387 aaKnown RBP12.29□□□□□ -0.44
ERBB2-208ENST00000578630 ATP2C2O75185 946 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 LRRN2O75325 713 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 HAPLN1P10915 354 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-208ENST00000578630 RAP1GAPP47736 663 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 NDST1P52848 882 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
ERBB2-208ENST00000578630 TPM4P67936 248 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 TWF1Q12792 350 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 LRMPQ12912 555 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 EXOC3L4Q17RC7 722 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 CYP4A22Q5TCH4 519 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 ITIH5Q86UX2 942 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 CRYBG2Q8N1P7 616 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 B3GALNT2Q8NCR0 500 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 FAM200AQ8TCP9 573 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 SEPT5Q99719 369 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-208ENST00000578630 PHF7Q9BWX1 381 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-208ENST00000578630 NT5C1AQ9BXI3 368 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 SDCBP2Q9H190 292 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 WDR6Q9NNW5 1121 aaKnown RBP12.29□□□□□ -0.44
ERBB2-208ENST00000578630 TMLHEQ9NVH6 421 aa12.29□□□□□ -0.44
ERBB2-208ENST00000578630 COL6A3P12111 3177 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 ZNF197O14709 1029 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 IL9P15248 144 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 CD58P19256 250 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 PSMC1P62191 440 aaKnown RBP12.28□□□□□ -0.44
ERBB2-208ENST00000578630 INCA1Q0VD86 236 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 CUL2Q13617 745 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 CFAP221Q4G0U5 840 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 MDH1BQ5I0G3 518 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 CDKAL1Q5VV42 579 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 GRASPQ7Z6J2 395 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-208ENST00000578630 ACOT1Q86TX2 421 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 PPM1KQ8N3J5 372 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 AOPEPQ8N6M6 819 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 LEMD2Q8NC56 503 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 LMO3Q8TAP4 145 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 ZNF707Q96C28 371 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-208ENST00000578630 ACSF2Q96CM8 615 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-208ENST00000578630 HEXIM2Q96MH2 286 aaKnown RBP12.28□□□□□ -0.44
ERBB2-208ENST00000578630 PKMYT1Q99640 499 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 CRACR2AQ9BSW2 395 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 MED10Q9BTT4 135 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 INTS2Q9H0H0 1204 aaKnown RBP12.28□□□□□ -0.44
ERBB2-208ENST00000578630 CRTAC1Q9NQ79 661 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 CISHQ9NSE2 258 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 GCNT4Q9P109 453 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 NR2E1Q9Y466 385 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 ATP8B3O60423 1300 aa12.28□□□□□ -0.44
ERBB2-208ENST00000578630 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.44
ERBB2-208ENST00000578630 MTCL1Q9Y4B5 1905 aaKnown RBP12.27□□□□□ -0.44
ERBB2-208ENST00000578630 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 HCRTO43612 131 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 CILPO75339 1184 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 VNN2O95498 520 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 BDNFP23560 247 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 CYP2F1P24903 491 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 ANXA13P27216 316 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 GRIK1P39086 918 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 MAGEA11P43364 429 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 GCNT1Q02742 428 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 NCAPHQ15003 741 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 PABPC1LQ4VXU2 614 aaKnown RBP12.27□□□□□ -0.45
ERBB2-208ENST00000578630 FKBP15Q5T1M5 1219 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 ENOSF1Q7L5Y1 443 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 OTOP3Q7RTS5 596 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 DNAJB7Q7Z6W7 309 aaPredicted RBP12.27□□□□□ -0.45
ERBB2-208ENST00000578630 SCN4BQ8IWT1 228 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 ADHFE1Q8IWW8 467 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 MYLPFQ96A32 169 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 JAKMIP2Q96AA8 810 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 PCED1BQ96HM7 432 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms