RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 NASPP49321 788 aaPredicted RBP13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 CYP4F8P98187 520 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 KCNA1Q09470 495 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 CCINQ13939 588 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 SLC39A14Q15043 492 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 ITPRIPL2Q3MIP1 535 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 WDR44Q5JSH3 913 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 RRAGBQ5VZM2 374 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 CMTM8Q8IZV2 173 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 SYNPOQ8N3V7 929 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 LINC00301Q8NCQ3 95 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 GIPC2Q8TF65 315 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 NOC3LQ8WTT2 800 aaKnown RBP13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 OLFML3Q9NRN5 406 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 ABI2Q9NYB9 513 aaPredicted RBP13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 NCOR2Q9Y618 2525 aa13.52□□□□□ -0.24
SMARCD2-207ENST00000578234 MYMKA6NI61 221 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 K7ESF4 209 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 SPTLC2O15270 562 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 HRO43593 1189 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 LRP3O75074 770 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 F11P03951 625 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 RETP07949 1114 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 HMGA1P17096 107 aaKnown RBP13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 TXLNAP40222 546 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 NLRP12P59046 1061 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 NUCB2P80303 420 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 TNK2Q07912 1038 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 DMWDQ09019 674 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 ALCAMQ13740 583 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 TMEM150AQ86TG1 271 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 BRSK2Q8IWQ3 736 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 CACTINQ8WUQ7 758 aaKnown RBP13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 ACCSQ96QU6 501 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 FAM213AQ9BRX8 229 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 RTKNQ9BST9 563 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 SMG9Q9H0W8 520 aaKnown RBP13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 PARD6AQ9NPB6 346 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 GKN1Q9NS71 199 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.25
SMARCD2-207ENST00000578234 TPRP12270 2363 aaKnown RBP13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 AXIN1O15169 862 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 GCNT3O95395 438 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 YEATS4O95619 227 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 CSH1P0DML2 217 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 CSH2P0DML3 217 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 GARTP22102 1010 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 AVPR1AP37288 418 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 WNT7BP56706 349 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 TFAMQ00059 246 aaKnown RBP13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 TSPY1Q01534 308 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 Q6ZS52 159 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 LONP2Q86WA8 852 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 LRRC52Q8N7C0 313 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 C1orf127Q8N9H9 656 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 ABCB6Q9NP58 842 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 GDAP2Q9NXN4 497 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 TBC1D7Q9P0N9 293 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 MAGED2Q9UNF1 606 aaPredicted RBP13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 AGAP1Q9UPQ3 857 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 MORC2Q9Y6X9 1032 aaPredicted RBP13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 CACNA1BQ00975 2339 aa13.51□□□□□ -0.25
SMARCD2-207ENST00000578234 FRMD3A2A2Y4 597 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 HUS1O60921 280 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 PRPF40AO75400 957 aaKnown RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 ITGB3P05106 788 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 PXNP49023 591 aaPredicted RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 RPL10AP62906 217 aaKnown RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 KRT85P78386 507 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 CCDC6Q16204 474 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 AASDHQ4L235 1098 aaPredicted RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 CCDC73Q6ZRK6 1079 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 MON1AQ86VX9 555 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 SYCP3Q8IZU3 236 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 TMEM86AQ8N2M4 240 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 CSGALNACT2Q8N6G5 542 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 MAB21L3Q8N8X9 362 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 ZSWIM2Q8NEG5 633 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 CXorf38Q8TB03 319 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 SPATA18Q8TC71 538 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 MRPS31Q92665 395 aaKnown RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 USP13Q92995 863 aaPredicted RBP13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 KIF9Q9HAQ2 790 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 GDPD2Q9HCC8 539 aa13.5□□□□□ -0.25
SMARCD2-207ENST00000578234 SEMA4GQ9NTN9 838 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms