RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 MRPL44Q9H9J2 332 aaKnown RBP15.3■□□□□ 0.04
SMARCD2-205ENST00000577686 IL21Q9HBE4 155 aa15.3■□□□□ 0.04
SMARCD2-205ENST00000577686 BLOC1S4Q9NUP1 217 aa15.3■□□□□ 0.04
SMARCD2-205ENST00000577686 DCHS1Q96JQ0 3298 aa15.3■□□□□ 0.04
SMARCD2-205ENST00000577686 DMXL1Q9Y485 3027 aa15.3■□□□□ 0.04
SMARCD2-205ENST00000577686 NCOR2Q9Y618 2525 aa15.3■□□□□ 0.04
SMARCD2-205ENST00000577686 TRDMT1O14717 391 aaKnown RBP15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 EPN2O95208 641 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 PDCP20941 246 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 PCSK1P29120 753 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 IFNAR2P48551 515 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 TFAMQ00059 246 aaKnown RBP15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 NR1H3Q13133 447 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 SRSF5Q13243 272 aaKnown RBP15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 ELF2Q15723 593 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 TMEM196Q5HYL7 178 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 MON1AQ86VX9 555 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 SYCP3Q8IZU3 236 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 TMEM130Q8N3G9 435 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 LRRC52Q8N7C0 313 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 LRRC3BQ96PB8 259 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 FAM83CQ9BQN1 747 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 ACBD6Q9BR61 282 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 TMEM206Q9H813 350 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 MAGED2Q9UNF1 606 aaPredicted RBP15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 PCDHB13Q9Y5F0 798 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 WDR87Q6ZQQ6 2873 aa15.29■□□□□ 0.04
SMARCD2-205ENST00000577686 TRAV19A0A0A6YYK7 116 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 ANKRD63C9JTQ0 380 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 RHOBTB1O94844 696 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 USP17L7P0C7H9 530 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 ZNF806P0C7X5 589 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 LHX1P48742 406 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 STXBP4Q6ZWJ1 553 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 ZNF720Q7Z2F6 126 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 C11orf74Q86VG3 221 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 SFR1Q86XK3 245 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 SPATA2LQ8IUW3 424 aaPredicted RBP15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 ATP2A3Q93084 1043 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 TRMT2BQ96GJ1 504 aaKnown RBP15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 P2RY13Q9BPV8 354 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 SMG9Q9H0W8 520 aaKnown RBP15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 EBF3Q9H4W6 596 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 RBAKQ9NYW8 714 aaPredicted RBP15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 ITGA11Q9UKX5 1188 aa15.28■□□□□ 0.04
SMARCD2-205ENST00000577686 KIAA0391O15091 583 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 AXIN1O15169 862 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 EXTL3O43909 919 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 F11P03951 625 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 CKMP06732 381 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 GARTP22102 1010 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 POLR2BP30876 1174 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 FAM160A1Q05DH4 1040 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 MYO1EQ12965 1108 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 MTF1Q14872 753 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 SF3A1Q15459 793 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 ST3GAL2Q16842 350 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 L1TD1Q5T7N2 865 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 C4orf50Q6ZRC1 276 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 SV2BQ7L1I2 683 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 DYMQ7RTS9 669 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 USP13Q92995 863 aaPredicted RBP15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 FIZ1Q96SL8 496 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 FAM213AQ9BRX8 229 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 PI4K2AQ9BTU6 479 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 ARRDC1-AS1Q9H2J1 176 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 TRPC7Q9HCX4 862 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 VPS45Q9NRW7 570 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 DDX43Q9NXZ2 648 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 AGAP1Q9UPQ3 857 aa15.27■□□□□ 0.04
SMARCD2-205ENST00000577686 TSC2P49815 1807 aa15.27■□□□□ 0.03
SMARCD2-205ENST00000577686 RNF40O75150 1001 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 GCNT3O95395 438 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 APBB3O95704 486 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 ITGB3P05106 788 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 HMGA1P17096 107 aaKnown RBP15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 RBP5P82980 135 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 KCNB1Q14721 858 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 SURF1Q15526 300 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 MAPRE1Q15691 268 aaKnown RBP15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 C8orf34Q49A92 452 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 INTS6LQ5JSJ4 861 aaKnown RBP15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 TXNDC8Q6A555 127 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 FSTL4Q6MZW2 842 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 CCDC73Q6ZRK6 1079 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 LRRTM3Q86VH5 581 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 EFCAB13Q8IY85 973 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 PDCL2Q8N4E4 241 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 TOP6BLQ8N6T0 577 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 OSCP1Q8WVF1 389 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 ANKRD36BP1Q96IX9 119 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 CEP295NLQ96MC4 621 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 HPS4Q9NQG7 708 aa15.26■□□□□ 0.03
SMARCD2-205ENST00000577686 DUS2Q9NX74 493 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms