RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 ZNF233A6NK53 670 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 PI15O43692 258 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 KLRC4O43908 158 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 KIF20AO95235 890 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 EPHB3P54753 998 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 GPC5P78333 572 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 PFKPQ01813 784 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 PRKCQQ04759 706 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 DUSP4Q13115 394 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 PSMD2Q13200 908 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 KMT5BQ4FZB7 885 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 COBLL1Q53SF7 1204 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 CYP4A22Q5TCH4 519 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 WSCD1Q658N2 575 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 KLHL10Q6JEL2 608 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 CCDC186Q7Z3E2 898 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 CBWD2Q8IUF1 395 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 WDR49Q8IV35 697 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 THEM5Q8N1Q8 247 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 TMEM86AQ8N2M4 240 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 TTC9BQ8N6N2 239 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 ATAD1Q8NBU5 361 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 SHKBP1Q8TBC3 707 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 SPPL2BQ8TCT7 592 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 TMEM174Q8WUU8 243 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 DNASE1L2Q92874 299 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 MCRS1Q96EZ8 462 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 DHTKD1Q96HY7 919 aaPredicted RBP11.36□□□□□ -0.59
LITAF-216ENST00000574848 PKMYT1Q99640 499 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 KXD1Q9BQD3 176 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 GPR88Q9GZN0 384 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 PCIF1Q9H4Z3 704 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 INTS13Q9NVM9 706 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 DLGAP2Q9P1A6 1054 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 CA14Q9ULX7 337 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 L1RE1Q9UN81 338 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 AGAP1Q9UPQ3 857 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 CTNND2Q9UQB3 1225 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 PATJQ8NI35 1801 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 MIA3Q5JRA6 1907 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 COL4A3Q01955 1670 aa11.36□□□□□ -0.59
LITAF-216ENST00000574848 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 PROB1E7EW31 1015 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 FGF19O95750 216 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 TPM2P07951 284 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 TMEM191BP0C7N4 346 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 ZNF18P17022 549 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 ATF6P18850 670 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 CASP1P29466 404 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 ALDH1A3P47895 512 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 TUFMP49411 452 aaKnown RBP11.35□□□□□ -0.59
LITAF-216ENST00000574848 RBP5P82980 135 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 PSMD6Q15008 389 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 MLF2Q15773 248 aaPredicted RBP11.35□□□□□ -0.59
LITAF-216ENST00000574848 SNRNP35Q16560 246 aaKnown RBP11.35□□□□□ -0.59
LITAF-216ENST00000574848 SLC39A12Q504Y0 691 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 FAM78AQ5JUQ0 283 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 TANGO2Q6ICL3 276 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 HS2ST1Q7LGA3 356 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 FAM114A1Q8IWE2 563 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 PDCL2Q8N4E4 241 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 TOP6BLQ8N6T0 577 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 CCDC112Q8NEF3 446 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 ST13P5Q8NFI4 369 aaPredicted RBP11.35□□□□□ -0.59
LITAF-216ENST00000574848 PJA1Q8NG27 643 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 DEPDC1BQ8WUY9 529 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 NELFBQ8WX92 580 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 SMARCD2Q92925 531 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 SHDQ96IW2 340 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 ANKRD36BP1Q96IX9 119 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 MKNK1Q9BUB5 465 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 PLA2G2FQ9BZM2 168 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 ABCB6Q9NP58 842 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 TRPV5Q9NQA5 729 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 RRAGDQ9NQL2 400 aaPredicted RBP11.35□□□□□ -0.59
LITAF-216ENST00000574848 DENND4CQ5VZ89 1909 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 NCANO14594 1321 aa11.35□□□□□ -0.59
LITAF-216ENST00000574848 GABRDO14764 452 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 FGFR1OPO95684 399 aaKnown RBP11.34□□□□□ -0.59
LITAF-216ENST00000574848 HAPLN1P10915 354 aaPredicted RBP11.34□□□□□ -0.59
LITAF-216ENST00000574848 MYL4P12829 197 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 WEE1P30291 646 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 NBL1P41271 181 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 CYP24A1Q07973 514 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 NFE2Q16621 373 aaPredicted RBP11.34□□□□□ -0.59
LITAF-216ENST00000574848 KNOP1Q1ED39 458 aaKnown RBP11.34□□□□□ -0.59
LITAF-216ENST00000574848 SCARA3Q6AZY7 606 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 VITQ6UXI7 678 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 DPH6Q7L8W6 267 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 TMC6Q7Z403 805 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 FILIP1Q7Z7B0 1213 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 ITIH5Q86UX2 942 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 LRRTM3Q86VH5 581 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 DCP1BQ8IZD4 617 aaKnown RBP11.34□□□□□ -0.59
LITAF-216ENST00000574848 ADSSL1Q8N142 457 aa11.34□□□□□ -0.59
LITAF-216ENST00000574848 CSGALNACT2Q8N6G5 542 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms