RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CDH8P55286 799 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 VEPH1Q14D04 833 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 NFKBIBQ15653 356 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 MGAT5BQ3V5L5 792 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 TCP11X2Q5H9J9 407 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 ITIH5Q86UX2 942 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 IRF2BP1Q8IU81 584 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 ATAD1Q8NBU5 361 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 EHBP1Q8NDI1 1231 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 FAM81BQ96LP2 452 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 ZNF512Q96ME7 567 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 BPIFA3Q9BQP9 254 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 TUBGCP2Q9BSJ2 902 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 PHF7Q9BWX1 381 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 APOBEC3GQ9HC16 384 aaKnown RBP13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 GTF3C4Q9UKN8 822 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 ASB3Q9Y575 518 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 ATP8B3O60423 1300 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 GTPBP10A4D1E9 387 aaKnown RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 BECN2A8MW95 431 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 PTPN2P17706 415 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 PTPN1P18031 435 aaKnown RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 RAP1GAPP47736 663 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 PSMC1P62191 440 aaKnown RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 RPL10AP62906 217 aaKnown RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 INCA1Q0VD86 236 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 TWF1Q12792 350 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 TAF12Q16514 161 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 CFAP221Q4G0U5 840 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 HSP90AA4PQ58FG1 418 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 FAM171BQ6P995 826 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 GBP6Q6ZN66 633 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 LEMD2Q8NC56 503 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 B3GALNT2Q8NCR0 500 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 MYCBPAPQ8TBZ2 947 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 ZNF707Q96C28 371 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 SEPT5Q99719 369 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 NT5C1AQ9BXI3 368 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 SLC27A5Q9Y2P5 690 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 YIPF1Q9Y548 306 aa13.61□□□□□ -0.23
TRAPPC1-206ENST00000573989 PTPRDP23468 1912 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 HAPLN1P10915 354 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 CD58P19256 250 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 ZNF165P49910 485 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 NDST1P52848 882 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 TPM4P67936 248 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 CYP27A1Q02318 531 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 LRMPQ12912 555 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 CUL2Q13617 745 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 ZSCAN23Q3MJ62 389 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 MDH1BQ5I0G3 518 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 VSTM1Q6UX27 236 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 DENND4AQ7Z401 1863 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 ADHFE1Q8IWW8 467 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 PPM1KQ8N3J5 372 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 ELMO3Q96BJ8 720 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 NDST4Q9H3R1 872 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 CRTAC1Q9NQ79 661 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 USTQ9Y2C2 406 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 CLUHO75153 1309 aa13.6□□□□□ -0.23
TRAPPC1-206ENST00000573989 DOCK6Q96HP0 2047 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 ZNF197O14709 1029 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 TRIM66O15016 1216 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 HCRTO43612 131 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 ATP2C2O75185 946 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 CILPO75339 1184 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 VNN2O95498 520 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 FGF19O95750 216 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 ANXA13P27216 316 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 MAGEA11P43364 429 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 GCNT1Q02742 428 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 CYP4A22Q5TCH4 519 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 CDKAL1Q5VV42 579 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 ENOSF1Q7L5Y1 443 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 OTOP3Q7RTS5 596 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 GRASPQ7Z6J2 395 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 ACOT1Q86TX2 421 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 ADAMTS19Q8TE59 1207 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 TATDN2Q93075 761 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 MYLPFQ96A32 169 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 PCED1BQ96HM7 432 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 CEP295NLQ96MC4 621 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 PKMYT1Q99640 499 aa13.59□□□□□ -0.23
TRAPPC1-206ENST00000573989 MED10Q9BTT4 135 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms