RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 RSPO2Q6UXX9 243 aaPredicted RBP23.12■■□□□ 1.29
UBFD1-210ENST00000571064 CLDN23Q96B33 292 aa23.12■■□□□ 1.29
UBFD1-210ENST00000571064 UROC1Q96N76 676 aa23.12■■□□□ 1.29
UBFD1-210ENST00000571064 CLSTN3Q9BQT9 956 aa23.12■■□□□ 1.29
UBFD1-210ENST00000571064 SIX4Q9UIU6 781 aa23.12■■□□□ 1.29
UBFD1-210ENST00000571064 PIRO00625 290 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 XPOTO43592 962 aaKnown RBP23.11■■□□□ 1.29
UBFD1-210ENST00000571064 C8AP07357 584 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 HNRNPA1P09651 372 aaKnown RBP eCLIP23.11■■□□□ 1.29
UBFD1-210ENST00000571064 MAGEA9P43362 315 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 MARSP56192 900 aaKnown RBP23.11■■□□□ 1.29
UBFD1-210ENST00000571064 PFKPQ01813 784 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 ENPEPQ07075 957 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 PPP3CAQ08209 521 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 DUOXA2Q1HG44 320 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 LIN9Q5TKA1 542 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 TPRG1Q6ZUI0 275 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 HASPINQ8TF76 798 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 CACTINQ8WUQ7 758 aaKnown RBP23.11■■□□□ 1.29
UBFD1-210ENST00000571064 DDX27Q96GQ7 796 aaKnown RBP23.11■■□□□ 1.29
UBFD1-210ENST00000571064 THAP9Q9H5L6 903 aa23.11■■□□□ 1.29
UBFD1-210ENST00000571064 SAMSN1Q9NSI8 373 aaKnown RBP23.11■■□□□ 1.29
UBFD1-210ENST00000571064 ARMCX3Q9UH62 379 aaPredicted RBP23.11■■□□□ 1.29
UBFD1-210ENST00000571064 MAP1BP46821 2468 aaKnown RBP23.1■■□□□ 1.29
UBFD1-210ENST00000571064 C4BPAP04003 597 aaKnown RBP23.1■■□□□ 1.29
UBFD1-210ENST00000571064 ADRB1P08588 477 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 TMEM191BP0C7N4 346 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 KRT13P13646 458 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 CCDC40Q4G0X9 1142 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 TRAPPC11Q7Z392 1133 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 ANKRD36BP1Q96IX9 119 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 BPIFA3Q9BQP9 254 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 HCFC1R1Q9NWW0 138 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 NFE2L3Q9Y4A8 694 aa23.1■■□□□ 1.29
UBFD1-210ENST00000571064 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.1■■□□□ 1.29
UBFD1-210ENST00000571064 TMEM189-UBE2V1I3L0A0 370 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 IKBKBO14920 756 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 ADAM12O43184 909 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 TBC1D4O60343 1298 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 FGFR1OPO95684 399 aaKnown RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 GNA14O95837 355 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 ITGB3P05106 788 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 POLR2BP30876 1174 aaKnown RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 TPD52L1Q16890 204 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 HSP90AA4PQ58FG1 418 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 TDRD10Q5VZ19 366 aaKnown RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 CEP57Q86XR8 500 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 TRIM59Q8IWR1 403 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 DHX40Q8IX18 779 aaKnown RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 SLC35C1Q96A29 364 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 CNOT6LQ96LI5 555 aaKnown RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 HSD3B7Q9H2F3 369 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 METTL14Q9HCE5 456 aaKnown RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 PRMT8Q9NR22 394 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-210ENST00000571064 GMEB2Q9UKD1 530 aa23.09■■□□□ 1.29
UBFD1-210ENST00000571064 SF3B1O75533 1304 aaKnown RBP eCLIP23.08■■□□□ 1.298e-13■■■■■ 68.9
UBFD1-210ENST00000571064 B3GAT3O94766 335 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 CST3P01034 146 aaPredicted RBP23.08■■□□□ 1.29
UBFD1-210ENST00000571064 TNNC2P02585 160 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 GCLMP48507 274 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 MYL5Q02045 173 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 MTAPQ13126 283 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 FZD5Q13467 585 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 PSMD5Q16401 504 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 LPAL2Q16609 132 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 FAM171A1Q5VUB5 890 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 SV2AQ7L0J3 742 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 NPAS3Q8IXF0 933 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 AOPEPQ8N6M6 819 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 LNX1Q8TBB1 728 aaPredicted RBP23.08■■□□□ 1.29
UBFD1-210ENST00000571064 ING5Q8WYH8 240 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 NELL2Q99435 816 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 TTPALQ9BTX7 342 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 PLA2G2FQ9BZM2 168 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 FANCLQ9NW38 375 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 ITGA11Q9UKX5 1188 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 AGAP1Q9UPQ3 857 aa23.08■■□□□ 1.29
UBFD1-210ENST00000571064 I3L4J1 428 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 NCAM2O15394 837 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 XYLBO75191 536 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 VNN1O95497 513 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 HOXA9P31269 272 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 BRCC3P46736 316 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 RPS9P46781 194 aaKnown RBP23.07■■□□□ 1.28
UBFD1-210ENST00000571064 ZNF165P49910 485 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 AP3M2P53677 418 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 SPEM2Q0P670 501 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 IQCB1Q15051 598 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 ZACNQ401N2 412 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 DCAF17Q5H9S7 520 aaPredicted RBP23.07■■□□□ 1.28
UBFD1-210ENST00000571064 CDKAL1Q5VV42 579 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 LRSAM1Q6UWE0 723 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 SLC7A14Q8TBB6 771 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 PIK3R5Q8WYR1 880 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 NAT10Q9H0A0 1025 aaKnown RBP23.07■■□□□ 1.28
UBFD1-210ENST00000571064 MMRN2Q9H8L6 949 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 HEBP1Q9NRV9 189 aa23.07■■□□□ 1.28
UBFD1-210ENST00000571064 DNMT3BQ9UBC3 853 aaKnown RBP23.07■■□□□ 1.28
UBFD1-210ENST00000571064 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.07■■□□□ 1.28
UBFD1-210ENST00000571064 NOTCH4Q99466 2003 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms