RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 VEGFAP15692 232 aaPredicted RBP16.02■□□□□ 0.15
CIITA-204ENST00000570546 UGP2Q16851 508 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 FAXCQ5TGI0 409 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 POTEAQ6S8J7 498 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 DCLK3Q9C098 648 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 RCCD1A6NED2 376 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 GH1P01241 217 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 CDC42EP1Q00587 391 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 TBCCQ15814 346 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 IMPG1Q17R60 797 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 BOLA3Q53S33 107 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 GLIS3Q8NEA6 775 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 PTPRN2Q92932 1015 aa16.02■□□□□ 0.15
CIITA-204ENST00000570546 WARS2Q9UGM6 360 aaKnown RBP16.02■□□□□ 0.15
CIITA-204ENST00000570546 OGTO15294 1046 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 IL10P22301 178 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 HADHAP40939 763 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 ORC1Q13415 861 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 PRAMEF18Q5VWM3 479 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 PBXIP1Q96AQ6 731 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 TMEM121Q9BTD3 319 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 CASZ1Q86V15 1759 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 AIM2O14862 343 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 HBP1O60381 514 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 PYGMP11217 842 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 MCL1Q07820 350 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 TRADDQ15628 312 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
CIITA-204ENST00000570546 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 SV2AQ7L0J3 742 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 OTOP1Q7RTM1 612 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 TATDN2Q93075 761 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 PAFAH2Q99487 392 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 CDYLQ9Y232 598 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 CD4P01730 458 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 VIL1P09327 827 aaKnown RBP16.01■□□□□ 0.15
CIITA-204ENST00000570546 SUPT20HL2P0C7V6 817 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 ARHGDIAP52565 204 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 SLC30A10Q6XR72 485 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 CDR2LQ86X02 465 aaPredicted RBP16.01■□□□□ 0.15
CIITA-204ENST00000570546 MCOLN2Q8IZK6 566 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 ATPAF2Q8N5M1 289 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 ZNF518BQ9C0D4 1074 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 NFIBO00712 420 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 MRPS35P82673 323 aaKnown RBP16.01■□□□□ 0.15
CIITA-204ENST00000570546 ASAP3Q8TDY4 903 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 MRPL1Q9BYD6 325 aaKnown RBP16.01■□□□□ 0.15
CIITA-204ENST00000570546 NAALADL1Q9UQQ1 740 aa16.01■□□□□ 0.15
CIITA-204ENST00000570546 EPHB6O15197 1021 aa16■□□□□ 0.15
CIITA-204ENST00000570546 ANP32DO95626 131 aa16■□□□□ 0.15
CIITA-204ENST00000570546 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
CIITA-204ENST00000570546 CYTH1Q15438 398 aa16■□□□□ 0.15
CIITA-204ENST00000570546 TFB1MQ8WVM0 346 aaKnown RBP16■□□□□ 0.15
CIITA-204ENST00000570546 SLC5A5Q92911 643 aa16■□□□□ 0.15
CIITA-204ENST00000570546 SH3GL3Q99963 347 aa16■□□□□ 0.15
CIITA-204ENST00000570546 PXMP2Q9NR77 195 aa16■□□□□ 0.15
CIITA-204ENST00000570546 NSMCE4AQ9NXX6 385 aa16■□□□□ 0.15
CIITA-204ENST00000570546 AURKCQ9UQB9 309 aa16■□□□□ 0.15
CIITA-204ENST00000570546 CDY2AQ9Y6F7 541 aa16■□□□□ 0.15
CIITA-204ENST00000570546 CDY1Q9Y6F8 540 aa16■□□□□ 0.15
CIITA-204ENST00000570546 PIK3CDO00329 1044 aa16■□□□□ 0.15
CIITA-204ENST00000570546 ATP6V1G2O95670 118 aa16■□□□□ 0.15
CIITA-204ENST00000570546 INPP1P49441 399 aa16■□□□□ 0.15
CIITA-204ENST00000570546 AGBL3Q8NEM8 1001 aa16■□□□□ 0.15
CIITA-204ENST00000570546 ARHGEF38Q9NXL2 777 aa16■□□□□ 0.15
CIITA-204ENST00000570546 PCDHA3Q9Y5H8 950 aa16■□□□□ 0.15
CIITA-204ENST00000570546 FRMPD4Q14CM0 1322 aa16■□□□□ 0.15
CIITA-204ENST00000570546 MYO5BQ9ULV0 1848 aa16■□□□□ 0.15
CIITA-204ENST00000570546 TRIP10Q15642 601 aa16■□□□□ 0.15
CIITA-204ENST00000570546 DCAF6Q58WW2 860 aa16■□□□□ 0.15
CIITA-204ENST00000570546 C16orf87Q6PH81 154 aa16■□□□□ 0.15
CIITA-204ENST00000570546 SAMD3Q8N6K7 520 aa16■□□□□ 0.15
CIITA-204ENST00000570546 URGCPQ8TCY9 931 aa16■□□□□ 0.15
CIITA-204ENST00000570546 ULK4Q96C45 1275 aa16■□□□□ 0.15
CIITA-204ENST00000570546 VPS33BQ9H267 617 aa16■□□□□ 0.15
CIITA-204ENST00000570546 RXFP1Q9HBX9 757 aa16■□□□□ 0.15
CIITA-204ENST00000570546 DDX4Q9NQI0 724 aaKnown RBP16■□□□□ 0.15
CIITA-204ENST00000570546 ERAP1Q9NZ08 941 aa16■□□□□ 0.15
CIITA-204ENST00000570546 SNX5Q9Y5X3 404 aa16■□□□□ 0.15
CIITA-204ENST00000570546 TMEM62Q0P6H9 643 aa16■□□□□ 0.15
CIITA-204ENST00000570546 ZNF235Q14590 738 aa16■□□□□ 0.15
CIITA-204ENST00000570546 EFHC1Q5JVL4 640 aa16■□□□□ 0.15
CIITA-204ENST00000570546 LRRC55Q6ZSA7 311 aa16■□□□□ 0.15
CIITA-204ENST00000570546 LRRC6Q86X45 466 aa16■□□□□ 0.15
CIITA-204ENST00000570546 SLC7A14Q8TBB6 771 aa16■□□□□ 0.15
CIITA-204ENST00000570546 DEFB129Q9H1M3 183 aa16■□□□□ 0.15
CIITA-204ENST00000570546 SLC24A2Q9UI40 661 aa16■□□□□ 0.15
CIITA-204ENST00000570546 SLIT3O75094 1523 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 SPATA31A6Q5VVP1 1343 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 WTIPA6NIX2 430 aaPredicted RBP15.99■□□□□ 0.15
CIITA-204ENST00000570546 ENO4A6NNW6 628 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 UBTFL6P0CB48 400 aaPredicted RBP15.99■□□□□ 0.15
CIITA-204ENST00000570546 RCN1Q15293 331 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 ANGPTL8Q6UXH0 198 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 F8W8V4 182 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 ANGPT2O15123 496 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 GAS2O43903 313 aaKnown RBP15.99■□□□□ 0.15
CIITA-204ENST00000570546 LSM8O95777 96 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms