RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 SYT15Q9BQS2 421 aa10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 ZNF518BQ9C0D4 1074 aa10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 ELOVL4Q9GZR5 314 aa10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 SMG9Q9H0W8 520 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 NUP62CLQ9H1M0 184 aa10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 IL21Q9HBE4 155 aa10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 TMEM63CQ9P1W3 806 aa10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 HOOK1Q9UJC3 728 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-212ENST00000570129 MYO10Q9HD67 2058 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 TSC2P49815 1807 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 PSMA7O14818 248 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 IKBKBO14920 756 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 MAPK13O15264 365 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 BEST1O76090 585 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 CLSTN1O94985 981 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 KIF20AO95235 890 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 LRG1P02750 347 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 EPB41P11171 864 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 LAMP2P13473 410 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 CCDC130P13994 396 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 PTPN2P17706 415 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 CD58P19256 250 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 VIPR2P41587 438 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 NDST1P52848 882 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 NLRP12P59046 1061 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 CYP4F8P98187 520 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 PAK1Q13153 545 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 TANGO2Q6ICL3 276 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 GJB7Q6PEY0 223 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 C11orf57Q6ZUT1 292 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 INTS8Q75QN2 995 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 FILIP1Q7Z7B0 1213 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 CREBRFQ8IUR6 639 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 ARHGEF19Q8IW93 802 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 SCN4BQ8IWT1 228 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 TDRD5Q8NAT2 981 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 LMO3Q8TAP4 145 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 PCED1BQ96HM7 432 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 NECTIN4Q96NY8 510 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 KCNK16Q96T55 309 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 TSG101Q99816 390 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 ACBD6Q9BR61 282 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 MKNK1Q9BUB5 465 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 KCNK12Q9HB15 430 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 TMEM8AQ9HCN3 771 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 SAMSN1Q9NSI8 373 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 ARMCX3Q9UH62 379 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 DSEQ9UL01 958 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 FAM50BQ9Y247 325 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 MRPS23Q9Y3D9 190 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 COL4A3Q01955 1670 aa10.49□□□□□ -0.73
GTF3C1-212ENST00000570129 A0A1W2PRU2 124 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 FSD2A1L4K1 749 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 A8MXQ7 604 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 RNF225M0QZC1 329 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 TACC1O75410 805 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 C1RP00736 705 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 FCARP24071 287 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 HOXA9P31269 272 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 ATICP31939 592 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 TNNC1P63316 161 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 ZXDAP98168 799 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 CYP27A1Q02318 531 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 LRRC63Q05C16 580 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 PLD1Q13393 1074 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 HTR4Q13639 388 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 SGSM1Q2NKQ1 1148 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 ZNF394Q53GI3 561 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 ZNF667Q5HYK9 610 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 FAM78AQ5JUQ0 283 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 TRIM59Q8IWR1 403 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 ZDHHC14Q8IZN3 488 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 TMEM86AQ8N2M4 240 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 SLC44A3Q8N4M1 653 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 RIN3Q8TB24 985 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 SYAP1Q96A49 352 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 ZNF512Q96ME7 567 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 GBP4Q96PP9 640 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 CRACR2AQ9BSW2 395 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 BCO2Q9BYV7 579 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 FAM49BQ9NUQ9 324 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 RAB20Q9NX57 234 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 AJAP1Q9UKB5 411 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 CDH7Q9ULB5 785 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 MAGED2Q9UNF1 606 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 PCDHB5Q9Y5E4 795 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 MTCL1Q9Y4B5 1905 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 TECTAO75443 2155 aa10.48□□□□□ -0.73
GTF3C1-212ENST00000570129 SLC38A8A6NNN8 435 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 ANHXE9PGG2 379 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 SLC16A3O15427 465 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 DCXO43602 365 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 XYLBO75191 536 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 TADA3O75528 432 aa10.47□□□□□ -0.73
GTF3C1-212ENST00000570129 ALDH1A3P47895 512 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms