RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZNF862O60290 1169 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 ASMTLO95671 621 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 BCAP31P51572 246 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 ERVK-24P63145 666 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 PRKAA1Q13131 559 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 C15orf59Q2T9L4 293 aaPredicted RBP7.4□□□□□ -1.23
CNOT1-216ENST00000569240 SLC10A5Q5PT55 438 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 FAM160B1Q5W0V3 765 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 RDH13Q8NBN7 331 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 FAM45AQ8TCE6 357 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 ANO3Q9BYT9 981 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 MLXIPLQ9NP71 852 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 SF3B1O75533 1304 aaKnown RBP eCLIP7.4□□□□□ -1.232e-6■■■■■ 31.6
CNOT1-216ENST00000569240 KPNA3O00505 521 aaPredicted RBP7.4□□□□□ -1.23
CNOT1-216ENST00000569240 PDE8BO95263 885 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 KRT19P08727 400 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 HLA-DPA1P20036 260 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 PPARDQ03181 441 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 BNIP2Q12982 314 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 ACAP2Q15057 778 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 PDK4Q16654 411 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 METTL13Q8N6R0 699 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 HM13Q8TCT9 377 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 APOPT1Q96IL0 206 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 NOL6Q9H6R4 1146 aaKnown RBP7.4□□□□□ -1.23
CNOT1-216ENST00000569240 SLC9A2Q9UBY0 812 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 ANKARQ7Z5J8 1434 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PPP1R3GB7ZBB8 358 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 LDLRP01130 860 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 IFNA16P05015 189 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ANPEPP15144 967 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PRDX6P30041 224 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 CRKP46108 304 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 CCT3P49368 545 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 JAK3P52333 1124 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 DPH6Q7L8W6 267 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 SENP7Q9BQF6 1050 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ZBTB1Q9Y2K1 713 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ITGA2BP08514 1039 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 NUDT2P50583 147 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 XKR9Q5GH70 373 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 UNC45BQ8IWX7 931 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 CMTR1Q8N1G2 835 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ACMSDQ8TDX5 336 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 SETDB2Q96T68 719 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 SLC25A23Q9BV35 468 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 TBC1D10AQ9BXI6 508 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 UGT2B28Q9BY64 529 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PLEKHA5Q9HAU0 1116 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 RAD54BQ9Y620 910 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ALG6Q9Y672 507 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 TRDMT1O14717 391 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 AIM2O14862 343 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 LRRN2O75325 713 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 IFNA14P01570 189 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 MECOMQ03112 1051 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 SCARA3Q6AZY7 606 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 THNSL1Q8IYQ7 743 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ANKRD13AQ8IZ07 590 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 NDUFAF2Q8N183 169 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 MCUQ8NE86 351 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 OR7A2PQ8NGA2 310 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 VCPIP1Q96JH7 1222 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF221Q9UK13 617 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 NAGPAQ9UK23 515 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 STAP1Q9ULZ2 295 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PSMD13Q9UNM6 376 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 FARP2O94887 1054 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 LYNP07948 512 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ALDH1A3P47895 512 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF544Q6NX49 715 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 LRRC8DQ7L1W4 858 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ERI1Q8IV48 349 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 CCNYL1Q8N7R7 359 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 OR2W6PQ8NHA6 318 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 MYLK2Q9H1R3 596 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 CDC42EP4Q9H3Q1 356 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 HPS4Q9NQG7 708 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 DDX18Q9NVP1 670 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 ATPIF1Q9UII2 106 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PTBP2Q9UKA9 531 aaKnown RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PRG3Q9Y2Y8 225 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PNMA6FA0A0J9YX94 578 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 NTRK1P04629 796 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 TNFAIP2Q03169 654 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 CHI3L2Q15782 390 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 MDM1Q8TC05 714 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 CAPSLQ8WWF8 208 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 PCDHGB4Q9UN71 923 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 SEC24DO94855 1032 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 MSLNQ13421 630 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-216ENST00000569240 SEL1L3Q68CR1 1132 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 TMC4Q7Z404 712 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 LRRC49Q8IUZ0 686 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 SPATA16Q9BXB7 569 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 MAPRE3Q9UPY8 281 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 UGGT1Q9NYU2 1555 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 MROH7-TTC4A0A0A0MT08 1334 aa7.39□□□□□ -1.23
CNOT1-216ENST00000569240 NEDD4P46934 1319 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms