RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 MDGA1Q8NFP4 955 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 ADAM32Q8TC27 787 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 LPIN3Q9BQK8 851 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 TARS2Q9BW92 718 aaKnown RBP9.4□□□□□ -0.9
SMG1-216ENST00000569122 SMG9Q9H0W8 520 aaKnown RBP9.4□□□□□ -0.9
SMG1-216ENST00000569122 TMEM206Q9H813 350 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 KMT5AQ9NQR1 393 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
SMG1-216ENST00000569122 POLR3BQ9NW08 1133 aaPredicted RBP9.4□□□□□ -0.9
SMG1-216ENST00000569122 KIAA1522Q9P206 1035 aaPredicted RBP9.4□□□□□ -0.9
SMG1-216ENST00000569122 CYP46A1Q9Y6A2 500 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 VWA8A3KMH1 1905 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 TRAV19A0A0A6YYK7 116 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 CLDN3O15551 220 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 CDC45O75419 566 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 MED24O75448 989 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
SMG1-216ENST00000569122 F11P03951 625 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 CYP11A1P05108 521 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 CLTAP09496 248 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 USP17L7P0C7H9 530 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 NPTX2P47972 431 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 SMTNP53814 917 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 PEX3P56589 373 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 PREPLQ4J6C6 727 aaPredicted RBP9.39□□□□□ -0.91
SMG1-216ENST00000569122 SLC39A12Q504Y0 691 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 C2orf27AQ580R0 203 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 SCUBE3Q8IX30 993 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 MINDY1Q8N5J2 469 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 FSIP1Q8NA03 581 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 FNBP1Q96RU3 617 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 ZDHHC5Q9C0B5 715 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 FAM124BQ9H5Z6 455 aaPredicted RBP9.39□□□□□ -0.91
SMG1-216ENST00000569122 TMEM74BQ9NUR3 256 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 ARHGAP28Q9P2N2 729 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 TUBGCP4Q9UGJ1 667 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 SUSD2Q9UGT4 822 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 MBD1Q9UIS9 605 aaPredicted RBP9.39□□□□□ -0.91
SMG1-216ENST00000569122 CCL26Q9Y258 94 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 LOC400499M0QZD8 3231 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 SPAG17Q6Q759 2223 aa9.39□□□□□ -0.91
SMG1-216ENST00000569122 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 H0YCG3 227 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 SOAT2O75908 522 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 REC8O95072 547 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 CKMP06732 381 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 FTH1P19P0C7X4 201 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 HAPLN1P10915 354 aaPredicted RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 HARSP12081 509 aaKnown RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 CD59P13987 128 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 GNSP15586 552 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 ITPKAP23677 461 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 U2AF2P26368 475 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG1-216ENST00000569122 PTGER3P43115 390 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 MATR3P43243 847 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG1-216ENST00000569122 LILRA4P59901 499 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 RPL10AP62906 217 aaKnown RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 PPP2R3AQ06190 1150 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 STK3Q13188 491 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 ORC2Q13416 577 aaPredicted RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 NBR1Q14596 966 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 ZBTB6Q15916 424 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 SYCP2LQ5T4T6 812 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 TXNDC8Q6A555 127 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 ZPBP2Q6X784 338 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 ARMCX6Q7L4S7 300 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 TRMT11Q7Z4G4 463 aaKnown RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 GLRX5Q86SX6 157 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 CD302Q8IX05 232 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 GALNT15Q8N3T1 639 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 BBC3Q96PG8 261 aaPredicted RBP9.38□□□□□ -0.91
SMG1-216ENST00000569122 ZCWPW1Q9H0M4 648 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 BHMT2Q9H2M3 363 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 CAPN10Q9HC96 672 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 RAXQ9Y2V3 346 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 AKAP13Q12802 2813 aa9.38□□□□□ -0.91
SMG1-216ENST00000569122 A0A087WV48 116 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 TTC26A0AVF1 554 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 E9PAM4 449 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 K7EQS6 105 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 SLC9A3R1O14745 358 aaPredicted RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 CAPN9O14815 690 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 EPB41L2O43491 1005 aaKnown RBP9.37□□□□□ -0.91
SMG1-216ENST00000569122 SH3BP5O60239 455 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 ZNF217O75362 1048 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 TCF3P15923 654 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 PFKLP17858 780 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 ATF6P18850 670 aa9.37□□□□□ -0.91
SMG1-216ENST00000569122 SCP2P22307 547 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms