RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 OGTO15294 1046 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 TOP3BO95985 862 aaKnown RBP13.49□□□□□ -0.25
SNX29-207ENST00000568949 HMGA1P17096 107 aaKnown RBP13.49□□□□□ -0.25
SNX29-207ENST00000568949 DGKEP52429 567 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 C9orf57Q5W0N0 161 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 LRSAM1Q6UWE0 723 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 KCNK18Q7Z418 384 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 CYP2U1Q7Z449 544 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 METTL23Q86XA0 190 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 KCTD17Q8N5Z5 321 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 RIN3Q8TB24 985 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
SNX29-207ENST00000568949 EZH1Q92800 747 aaPredicted RBP13.49□□□□□ -0.25
SNX29-207ENST00000568949 CD101Q93033 1021 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 NOL7Q9UMY1 257 aaKnown RBP13.49□□□□□ -0.25
SNX29-207ENST00000568949 OBSL1O75147 1896 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 GON4LQ3T8J9 2241 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 PI4KAP42356 2102 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 ANO9A1A5B4 782 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 FAM189A1O60320 539 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 SCP2P22307 547 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 NMT1P30419 496 aaKnown RBP13.48□□□□□ -0.25
SNX29-207ENST00000568949 LIG4P49917 911 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 MTF1Q14872 753 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 NAIF1Q69YI7 327 aaPredicted RBP13.48□□□□□ -0.25
SNX29-207ENST00000568949 TXNDC8Q6A555 127 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 LRRTM3Q86VH5 581 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 RASSF3Q86WH2 238 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 TSTD1Q8NFU3 115 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 ZCCHC14Q8WYQ9 949 aaKnown RBP13.48□□□□□ -0.25
SNX29-207ENST00000568949 BICD1Q96G01 975 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 KCND2Q9NZV8 630 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 EVLQ9UI08 416 aaPredicted RBP13.48□□□□□ -0.25
SNX29-207ENST00000568949 DERAQ9Y315 318 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 NEUROG3Q9Y4Z2 214 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 CACNA1EQ15878 2313 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 ZZEF1O43149 2961 aa13.48□□□□□ -0.25
SNX29-207ENST00000568949 PP2D1A8MPX8 630 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 LAD1O00515 517 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 PIGRP01833 764 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 CSH1P0DML2 217 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 CSH2P0DML3 217 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX29-207ENST00000568949 CDC25AP30304 524 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 PRPHP41219 470 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 NCKAP1LP55160 1127 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 IRX4P78413 519 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 FAM160A1Q05DH4 1040 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 RING1Q06587 406 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 ST3GAL1Q11201 340 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 LMAN2Q12907 356 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 NBR1Q14596 966 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 JADE1Q6IE81 842 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 SYT2Q8N9I0 419 aaPredicted RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 FBXO18Q8NFZ0 1043 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 OSCP1Q8WVF1 389 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 ATP2A3Q93084 1043 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 CNOT6LQ96LI5 555 aaKnown RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 MMTAG2Q9BU76 263 aaKnown RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 CCSER1Q9C0I3 900 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 TMEM206Q9H813 350 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 DUS2Q9NX74 493 aaKnown RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 ABI2Q9NYB9 513 aaPredicted RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 LARSQ9P2J5 1176 aaKnown RBP13.47□□□□□ -0.25
SNX29-207ENST00000568949 LHX6Q9UPM6 363 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 INVSQ9Y283 1065 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 MSRB2Q9Y3D2 182 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 TCHHQ07283 1943 aa13.47□□□□□ -0.25
SNX29-207ENST00000568949 PATE3B3GLJ2 98 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 CYB561D2O14569 222 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 NFICP08651 508 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 IFNAR2P48551 515 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 RAD51AP2Q09MP3 1159 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 NR1H3Q13133 447 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 PSMD2Q13200 908 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 UAP1L1Q3KQV9 507 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 HYIQ5T013 277 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 DEFB124Q8NES8 71 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.25
SNX29-207ENST00000568949 SLC32A1Q9H598 525 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 ASB7Q9H672 318 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 UXTQ9UBK9 157 aaPredicted RBP13.46□□□□□ -0.25
SNX29-207ENST00000568949 CPSF3Q9UKF6 684 aaKnown RBP13.46□□□□□ -0.25
SNX29-207ENST00000568949 PCDHB5Q9Y5E4 795 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 PTPRDP23468 1912 aa13.46□□□□□ -0.25
SNX29-207ENST00000568949 A0A0B4J269 797 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 HNRNPDLO14979 420 aaKnown RBP13.45□□□□□ -0.26
SNX29-207ENST00000568949 TCF3P15923 654 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 BCKDHBP21953 392 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 DHPSP49366 369 aaPredicted RBP13.45□□□□□ -0.26
SNX29-207ENST00000568949 TAF6P49848 677 aa13.45□□□□□ -0.26
SNX29-207ENST00000568949 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
SNX29-207ENST00000568949 CDR1P51861 262 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms