RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 ZNF334Q9HCZ1 680 aaPredicted RBP13.85□□□□□ -0.19
TSC2-220ENST00000568238 RMND1Q9NWS8 449 aa13.85□□□□□ -0.19
TSC2-220ENST00000568238 ABI2Q9NYB9 513 aaPredicted RBP13.85□□□□□ -0.19
TSC2-220ENST00000568238 MRPS17Q9Y2R5 130 aaKnown RBP13.85□□□□□ -0.19
TSC2-220ENST00000568238 MTF2Q9Y483 593 aaPredicted RBP13.85□□□□□ -0.19
TSC2-220ENST00000568238 DCHS1Q96JQ0 3298 aa13.85□□□□□ -0.19
TSC2-220ENST00000568238 NCANO14594 1321 aa13.85□□□□□ -0.19
TSC2-220ENST00000568238 UBE4BO95155 1302 aa13.85□□□□□ -0.19
TSC2-220ENST00000568238 HEPACAM2A8MVW5 462 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 HUS1O60921 280 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 RHOBTB3O94955 611 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 KRT19P08727 400 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 ATF6P18850 670 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 TARSP26639 723 aaKnown RBP13.84□□□□□ -0.19
TSC2-220ENST00000568238 GABRR2P28476 465 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 KCNB1Q14721 858 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 TAF12Q16514 161 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 ARHGAP15Q53QZ3 475 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 STXBP5Q5T5C0 1151 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 LRRTM3Q86VH5 581 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 MFSD6LQ8IWD5 586 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 ELOA2Q8IYF1 753 aaPredicted RBP13.84□□□□□ -0.19
TSC2-220ENST00000568238 SMYD4Q8IYR2 804 aaPredicted RBP13.84□□□□□ -0.19
TSC2-220ENST00000568238 TMEM86AQ8N2M4 240 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 PDCL2Q8N4E4 241 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 CSGALNACT2Q8N6G5 542 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 SCFD1Q8WVM8 642 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 ANKRD36BP1Q96IX9 119 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 NELL2Q99435 816 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 ATXN3LQ9H3M9 355 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 TRPV5Q9NQA5 729 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 SPATA6Q9NWH7 488 aaPredicted RBP13.84□□□□□ -0.19
TSC2-220ENST00000568238 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 SIX4Q9UIU6 781 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 L1RE1Q9UN81 338 aa13.84□□□□□ -0.19
TSC2-220ENST00000568238 R3HCC1Q9Y3T6 440 aaKnown RBP13.84□□□□□ -0.19
TSC2-220ENST00000568238 OTOGLQ3ZCN5 2332 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 ZNF233A6NK53 670 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 BIN1O00499 593 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 MAN2B1O00754 1011 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 ZNF263O14978 683 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 NCAM2O15394 837 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 TNNC2P02585 160 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 SP9P0CG40 484 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 HAPLN1P10915 354 aaPredicted RBP13.83□□□□□ -0.2
TSC2-220ENST00000568238 CDC25CP30307 473 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 HOXD13P35453 343 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 RBP5P82980 135 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 PSMD2Q13200 908 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 SURF1Q15526 300 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 NFE2Q16621 373 aaPredicted RBP13.83□□□□□ -0.2
TSC2-220ENST00000568238 GPR158Q5T848 1215 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 LMBRD2Q68DH5 695 aaPredicted RBP13.83□□□□□ -0.2
TSC2-220ENST00000568238 ISM2Q6H9L7 571 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 CBWD2Q8IUF1 395 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 YAF2Q8IY57 180 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 ADGRF2Q8IZF7 708 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 CXorf38Q8TB03 319 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 SPATA20Q8TB22 786 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 GSDMAQ96QA5 445 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 KIAA1586Q9HCI6 787 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 INTS13Q9NVM9 706 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 GDAP2Q9NXN4 497 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 DDX43Q9NXZ2 648 aaKnown RBP13.83□□□□□ -0.2
TSC2-220ENST00000568238 MAN1B1Q9UKM7 699 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 MAPK8IP1Q9UQF2 711 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 PCDHB5Q9Y5E4 795 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 SNX9Q9Y5X1 595 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 R4GN57 208 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 PTPRDP23468 1912 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 PTPRJQ12913 1337 aa13.83□□□□□ -0.2
TSC2-220ENST00000568238 ARNTLO00327 626 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 LAMTOR5O43504 91 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 RPS9P46781 194 aaKnown RBP13.82□□□□□ -0.2
TSC2-220ENST00000568238 CYP4F8P98187 520 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 MYL7Q01449 175 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 FCHO2Q0JRZ9 810 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 MYO1EQ12965 1108 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 INTS6LQ5JSJ4 861 aaKnown RBP13.82□□□□□ -0.2
TSC2-220ENST00000568238 ARID3BQ8IVW6 561 aaPredicted RBP13.82□□□□□ -0.2
TSC2-220ENST00000568238 MAML2Q8IZL2 1156 aaPredicted RBP13.82□□□□□ -0.2
TSC2-220ENST00000568238 TOP6BLQ8N6T0 577 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 SPATA18Q8TC71 538 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 ZNF507Q8TCN5 953 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 GIPC2Q8TF65 315 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 CLDN23Q96B33 292 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 RSPRY1Q96DX4 576 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 ACBD6Q9BR61 282 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 SEMA4AQ9H3S1 761 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 ABCB6Q9NP58 842 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 AGPAT3Q9NRZ7 376 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 TMLHEQ9NVH6 421 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 NDRG2Q9UN36 371 aaKnown RBP13.82□□□□□ -0.2
TSC2-220ENST00000568238 GREB1Q4ZG55 1949 aa13.82□□□□□ -0.2
TSC2-220ENST00000568238 DNAH14Q0VDD8 3507 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 SHISA7A6NL88 538 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 DPYSL4O14531 572 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 CHADO15335 359 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms