RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 SNX21Q969T3 373 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 ACBD6Q9BR61 282 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 PARD6AQ9NPB6 346 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 RBAKQ9NYW8 714 aaPredicted RBP20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 MAGED2Q9UNF1 606 aaPredicted RBP20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 R3HCC1Q9Y3T6 440 aaKnown RBP20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 SCN1AP35498 2009 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 SOBPA7XYQ1 873 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 K7ESF4 209 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 HMGA1P17096 107 aaKnown RBP20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 STAT6P42226 847 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 RPL10AP62906 217 aaKnown RBP20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 MYL7Q01449 175 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 DMWDQ09019 674 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 FAM173BQ6P4H8 233 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 TMEM86AQ8N2M4 240 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 PDCL2Q8N4E4 241 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 C1orf127Q8N9H9 656 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 OLFML3Q9NRN5 406 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 TDP1Q9NUW8 608 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 PANK4Q9NVE7 773 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 TMLHEQ9NVH6 421 aa20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 DDX43Q9NXZ2 648 aaKnown RBP20.24■□□□□ 0.83
GTF3C1-207ENST00000567806 GOLGA8IPA6NC78 632 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 GOLGA8JA6NMD2 632 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 EXTL3O43909 919 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 KRT19P08727 400 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 SYT1P21579 422 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 RBP5P82980 135 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 AMPD2Q01433 879 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 GRSF1Q12849 480 aaKnown RBP eCLIP20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 RESTQ13127 1097 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 RUNX3Q13761 415 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 CCINQ13939 588 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 WDR44Q5JSH3 913 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 TXNDC8Q6A555 127 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 CC2D1AQ6P1N0 951 aaPredicted RBP20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 CEP68Q76N32 757 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 TMEM150AQ86TG1 271 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 HSCBQ8IWL3 235 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 LRRC52Q8N7C0 313 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 ZSWIM2Q8NEG5 633 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 FAM83CQ9BQN1 747 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 RTKNQ9BST9 563 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 PCIF1Q9H4Z3 704 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 TMEM206Q9H813 350 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 UXTQ9UBK9 157 aaPredicted RBP20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 ITGA11Q9UKX5 1188 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 L1RE1Q9UN81 338 aa20.23■□□□□ 0.83
GTF3C1-207ENST00000567806 LRP3O75074 770 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 HOXA6P31267 233 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 GPR15P49685 360 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 WNT7BP56706 349 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 DDR2Q16832 855 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 MON1AQ86VX9 555 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 LEO1Q8WVC0 666 aaPredicted RBP20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 USP13Q92995 863 aaPredicted RBP20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 EBF3Q9H4W6 596 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 KIF9Q9HAQ2 790 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 ABCB6Q9NP58 842 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 SNX9Q9Y5X1 595 aa20.22■□□□□ 0.83
GTF3C1-207ENST00000567806 ATG13O75143 517 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 TMEM191BP0C7N4 346 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 ACAT1P24752 427 aaKnown RBP20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 CYP2F1P24903 491 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 LHX1P48742 406 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 CASP5P51878 434 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 SRSF5Q13243 272 aaKnown RBP20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 BECN1Q14457 450 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 SLC39A14Q15043 492 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 INTS6LQ5JSJ4 861 aaKnown RBP20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 SDHAF4Q5VUM1 108 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 CCDC65Q8IXS2 484 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 CBWD1Q9BRT8 395 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 PDE11AQ9HCR9 933 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 C2orf42Q9NWW7 574 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 GDAP2Q9NXN4 497 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 GTF3C4Q9UKN8 822 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 CCL26Q9Y258 94 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 ANK1P16157 1881 aa20.21■□□□□ 0.83
GTF3C1-207ENST00000567806 DCDC2BA2VCK2 349 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 PRPF6O94906 941 aaKnown RBP20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 PCSK1P29120 753 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 MYO1EQ12965 1108 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 TRIM68Q6AZZ1 485 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 STXBP4Q6ZWJ1 553 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 WDR5BQ86VZ2 330 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 SPATA2LQ8IUW3 424 aaPredicted RBP20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 GPD1LQ8N335 351 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 TOP6BLQ8N6T0 577 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 SPATA18Q8TC71 538 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 EXOC4Q96A65 974 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 ANKRD36BP1Q96IX9 119 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 HPS4Q9NQG7 708 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 SEMA4GQ9NTN9 838 aa20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.2■□□□□ 0.82
GTF3C1-207ENST00000567806 DNAH14Q0VDD8 3507 aa20.19■□□□□ 0.82
GTF3C1-207ENST00000567806 TSC2P49815 1807 aa20.19■□□□□ 0.82
GTF3C1-207ENST00000567806 FRMD3A2A2Y4 597 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms