RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TXNDC11Q6PKC3 985 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 TMEM150AQ86TG1 271 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 MON1AQ86VX9 555 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 MRPS31Q92665 395 aaKnown RBP16.12■□□□□ 0.17
RNF40-209ENST00000566703 SAAL1Q96ER3 474 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 ZFYVE19Q96K21 471 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 FAM83CQ9BQN1 747 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 CBWD1Q9BRT8 395 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 PANK2Q9BZ23 570 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 TMLHEQ9NVH6 421 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 DDX43Q9NXZ2 648 aaKnown RBP16.12■□□□□ 0.17
RNF40-209ENST00000566703 SCN1AP35498 2009 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 GABRDO14764 452 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 LRP3O75074 770 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 RETP07949 1114 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 PCSK1P29120 753 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 AVPR1AP37288 418 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 CCINQ13939 588 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 ZNF268Q14587 947 aaPredicted RBP16.11■□□□□ 0.17
RNF40-209ENST00000566703 INTS6LQ5JSJ4 861 aaKnown RBP16.11■□□□□ 0.17
RNF40-209ENST00000566703 LONP2Q86WA8 852 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 GPD1LQ8N335 351 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 TOP6BLQ8N6T0 577 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 ZSWIM2Q8NEG5 633 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 TRMT2BQ96GJ1 504 aaKnown RBP16.11■□□□□ 0.17
RNF40-209ENST00000566703 FUBP3Q96I24 572 aaKnown RBP eCLIP16.11■□□□□ 0.17
RNF40-209ENST00000566703 MYRFLQ96LU7 910 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 PKMYT1Q99640 499 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 PI4K2AQ9BTU6 479 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 TNMDQ9H2S6 317 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 CUEDC2Q9H467 287 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 KIAA1586Q9HCI6 787 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
RNF40-209ENST00000566703 TDP1Q9NUW8 608 aa16.11■□□□□ 0.17
RNF40-209ENST00000566703 R3HCC1Q9Y3T6 440 aaKnown RBP16.11■□□□□ 0.17
RNF40-209ENST00000566703 TICRRQ7Z2Z1 1910 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 A0A087X0B3 334 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 K7ESF4 209 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 STX6O43752 255 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 PPP6R2O75170 966 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 NOL4O94818 638 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
RNF40-209ENST00000566703 TMEM191BP0C7N4 346 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 AMPD3Q01432 767 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 TNK2Q07912 1038 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 BFSP1Q12934 665 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 RUNX3Q13761 415 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 PON2Q15165 354 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 CFAP221Q4G0U5 840 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 LIMS2Q7Z4I7 341 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 MAB21L3Q8N8X9 362 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 LINC00301Q8NCQ3 95 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 USP13Q92995 863 aaPredicted RBP16.1■□□□□ 0.17
RNF40-209ENST00000566703 ANKRD36BP1Q96IX9 119 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 PDE11AQ9HCR9 933 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 INTS13Q9NVM9 706 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 KBTBD4Q9NVX7 518 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 SNX9Q9Y5X1 595 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 MYO15AQ9UKN7 3530 aa16.1■□□□□ 0.17
RNF40-209ENST00000566703 CCDC163A0A0D9SF12 145 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 GOLGA8IPA6NC78 632 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 GOLGA8JA6NMD2 632 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 CHURC1-FNTBB4DL54 471 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 TRDMT1O14717 391 aaKnown RBP16.09■□□□□ 0.17
RNF40-209ENST00000566703 HRO43593 1189 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 ATG13O75143 517 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 KRT19P08727 400 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 FAM163BP0C2L3 166 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 CYP2F1P24903 491 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 MAGEA11P43364 429 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 FNTBP49356 437 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 MYO1EQ12965 1108 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 SIM2Q14190 667 aaPredicted RBP16.09■□□□□ 0.17
RNF40-209ENST00000566703 PDGFRLQ15198 375 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 STK38Q15208 465 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 DUOXA2Q1HG44 320 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 TMEM196Q5HYL7 178 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 CNNM4Q6P4Q7 775 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 TTC8Q8TAM2 541 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 CEP295NLQ96MC4 621 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 FGFBP2Q9BYJ0 223 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 SMG9Q9H0W8 520 aaKnown RBP16.09■□□□□ 0.17
RNF40-209ENST00000566703 PCIF1Q9H4Z3 704 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 SIX4Q9UIU6 781 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 GTF3C4Q9UKN8 822 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 MAGED2Q9UNF1 606 aaPredicted RBP16.09■□□□□ 0.17
RNF40-209ENST00000566703 ANK1P16157 1881 aa16.09■□□□□ 0.17
RNF40-209ENST00000566703 MED19A0JLT2 244 aaPredicted RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 TULP1O00294 542 aaPredicted RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 EIF3DO15371 548 aaKnown RBP eCLIP16.08■□□□□ 0.16
RNF40-209ENST00000566703 FOXD2O60548 495 aaPredicted RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 TNNC2P02585 160 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 PDIA4P13667 645 aaKnown RBP16.08■□□□□ 0.16
RNF40-209ENST00000566703 GPR15P49685 360 aa16.08■□□□□ 0.16
RNF40-209ENST00000566703 CDR1P51861 262 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms