RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PSMA2P25787 234 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 HMGCS2P54868 508 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 GPX6P59796 221 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 OTUD4Q01804 1114 aaKnown RBP14.98□□□□□ -0.01
CDH1-209ENST00000566510 PIGHQ14442 188 aaPredicted RBP14.98□□□□□ -0.01
CDH1-209ENST00000566510 TAF1BQ53T94 588 aaPredicted RBP14.98□□□□□ -0.01
CDH1-209ENST00000566510 ANKRD20A2Q5SQ80 823 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 FNBP1LQ5T0N5 605 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 ANKRD20A1Q5TYW2 823 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 ANKRD20A3Q5VUR7 823 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 FYB2Q5VWT5 728 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 ANKRD22Q5VYY1 191 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 PPP1R2P3Q6NXS1 205 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 DRICH1Q6PGQ1 229 aaPredicted RBP14.98□□□□□ -0.01
CDH1-209ENST00000566510 OTOAQ7RTW8 1153 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 LONP2Q86WA8 852 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 PALM2Q8IXS6 379 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 MTMR14Q8NCE2 650 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 ACTL9Q8TC94 416 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 PCDH9Q9HC56 1237 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 KCNG1Q9UIX4 513 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 SHOC2Q9UQ13 582 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
CDH1-209ENST00000566510 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
CDH1-209ENST00000566510 CNTNAP2Q9UHC6 1331 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 PSME4Q14997 1843 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 ITGAVP06756 1048 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 FGFR1P11362 822 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 NEFHP12036 1026 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 CD19P15391 556 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 PHBP35232 272 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 TRPC3Q13507 836 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 BBS9Q3SYG4 887 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 MSS51Q4VC12 460 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 FAM182AQ5T1J6 154 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 NKX1-2Q9UD57 310 aaPredicted RBP14.97□□□□□ -0.01
CDH1-209ENST00000566510 SLC24A2Q9UI40 661 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 H0Y3Z8 333 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 TYROBPO43914 113 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 PAX7P23759 505 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 EPHB2P29323 1055 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 RFC1P35251 1148 aaPredicted RBP14.97□□□□□ -0.01
CDH1-209ENST00000566510 ARL4CP56559 192 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 OSTNP61366 133 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 TFAMQ00059 246 aaKnown RBP14.97□□□□□ -0.01
CDH1-209ENST00000566510 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 BZW1Q7L1Q6 419 aaKnown RBP14.97□□□□□ -0.01
CDH1-209ENST00000566510 MTDHQ86UE4 582 aaKnown RBP14.97□□□□□ -0.01
CDH1-209ENST00000566510 TEPSINQ96N21 525 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 TBC1D10AQ9BXI6 508 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 LRMDAQ9H2I8 198 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 DDX56Q9NY93 547 aaKnown RBP14.97□□□□□ -0.01
CDH1-209ENST00000566510 NXF1Q9UBU9 619 aaKnown RBP14.97□□□□□ -0.01
CDH1-209ENST00000566510 PCSK1NQ9UHG2 260 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 RABGEF1Q9UJ41 708 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 ZFP69BQ9UJL9 534 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 CNTN6Q9UQ52 1028 aa14.97□□□□□ -0.01
CDH1-209ENST00000566510 COL11A1P12107 1806 aaPredicted RBP14.96□□□□□ -0.01
CDH1-209ENST00000566510 BACE1P56817 501 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 SLC8A3P57103 927 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 TGFB2P61812 414 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 BASP1P80723 227 aaKnown RBP14.96□□□□□ -0.01
CDH1-209ENST00000566510 MAPK6Q16659 721 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 LRRC38Q5VT99 294 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 PPIL6Q8IXY8 311 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 AGGF1Q8N302 714 aaeCLIP14.96□□□□□ -0.01
CDH1-209ENST00000566510 FBXO36Q8NEA4 188 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 TFAP2BQ92481 460 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 PAFAH2Q99487 392 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 SYNCQ9H7C4 482 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 CYP39A1Q9NYL5 469 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 NFASCO94856 1347 aa14.96□□□□□ -0.01
CDH1-209ENST00000566510 A0A0G2JND7 137 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 SPATA31C2B4DYI2 1134 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 ASS1P00966 412 aaKnown RBP14.96□□□□□ -0.02
CDH1-209ENST00000566510 SRGAP2CP0DJJ0 459 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 TNFAIP1Q13829 316 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 TMEM132BQ14DG7 1078 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 TAF11Q15544 211 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 PRAMEF18Q5VWM3 479 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 NLRP9Q7RTR0 991 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 PCGF5Q86SE9 256 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 CCDC125Q86Z20 511 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 WDTC1Q8N5D0 677 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 EMC1Q8N766 993 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 ATP11CQ8NB49 1132 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 TCP10LQ8TDR4 215 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 C10orf82Q8WW14 230 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 NKD2Q969F2 451 aaPredicted RBP14.96□□□□□ -0.02
CDH1-209ENST00000566510 FAM167BQ9BTA0 163 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 DHX33Q9H6R0 707 aaKnown RBP14.96□□□□□ -0.02
CDH1-209ENST00000566510 GINM1Q9NU53 330 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 TJP2Q9UDY2 1190 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 CLUHO75153 1309 aa14.96□□□□□ -0.02
CDH1-209ENST00000566510 FER1L6Q2WGJ9 1857 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 KIF1CO43896 1103 aaKnown RBP14.95□□□□□ -0.02
CDH1-209ENST00000566510 KRT3P12035 628 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 RASSF2P50749 326 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 ZNF132P52740 706 aa14.95□□□□□ -0.02
CDH1-209ENST00000566510 ORC1Q13415 861 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms