RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 DNAJB3Q8WWF6 145 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 ARNTL2Q8WYA1 636 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 LHX5Q9H2C1 402 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 MRPL47Q9HD33 250 aaKnown RBP17.84■□□□□ 0.45
RAB40C-210ENST00000566290 KIAA1257Q9ULG3 409 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 PTPRSQ13332 1948 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 TMCO5BA8MYB1 307 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 KCNK3O14649 394 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 MED7O43513 233 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 CHRNA1P02708 482 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 CTNNA1P35221 906 aaKnown RBP17.83■□□□□ 0.44
RAB40C-210ENST00000566290 RBP5P82980 135 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 TAP1Q03518 808 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 KIZQ2M2Z5 673 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 ALKAL1Q6UXT8 129 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 TMEM192Q8IY95 271 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 ZNF606Q8WXB4 792 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 CPB2Q96IY4 423 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 FAM84AQ96KN4 292 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 PNKPQ96T60 521 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 ZSWIM1Q9BR11 485 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 NUP85Q9BW27 656 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 ACP6Q9NPH0 428 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 CNOT8Q9UFF9 292 aaKnown RBP17.83■□□□□ 0.44
RAB40C-210ENST00000566290 ALG6Q9Y672 507 aa17.83■□□□□ 0.44
RAB40C-210ENST00000566290 BHMG1C9JSJ3 638 aaPredicted RBP17.82■□□□□ 0.44
RAB40C-210ENST00000566290 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
RAB40C-210ENST00000566290 CALB1P05937 261 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 KCNE1P15382 129 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 MMP8P22894 467 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 YARSP54577 528 aaKnown RBP17.82■□□□□ 0.44
RAB40C-210ENST00000566290 MGAT3Q09327 533 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 STILQ15468 1287 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 FAM26DQ5JW98 314 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 FAM43BQ6ZT52 329 aaPredicted RBP17.82■□□□□ 0.44
RAB40C-210ENST00000566290 GJD3Q8N144 294 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 TMEM35BQ8NCS4 154 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 DBF4BQ8NFT6 615 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 FAM49AQ9H0Q0 323 aaPredicted RBP17.82■□□□□ 0.44
RAB40C-210ENST00000566290 SLITRK6Q9H5Y7 841 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.82■□□□□ 0.441e-6■■■□□ 16.2
RAB40C-210ENST00000566290 ZNF446Q9NWS9 450 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 WDFY4Q6ZS81 3184 aa17.82■□□□□ 0.44
RAB40C-210ENST00000566290 LPXNO60711 386 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 CILPO75339 1184 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 FAM163BP0C2L3 166 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 CYP3A5P20815 502 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 CXCR5P32302 372 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 VSNL1P62760 191 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 DEFB103AP81534 67 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 TMEM62Q0P6H9 643 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
RAB40C-210ENST00000566290 CNKSR3Q6P9H4 555 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 SPRED2Q7Z698 418 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 RSPH3Q86UC2 560 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 FAM212AQ96EL1 285 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 ZNF668Q96K58 619 aaPredicted RBP17.81■□□□□ 0.44
RAB40C-210ENST00000566290 PLVAPQ9BX97 442 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 RBM12Q9NTZ6 932 aaKnown RBP17.81■□□□□ 0.44
RAB40C-210ENST00000566290 STIM2Q9P246 746 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 CEP83Q9Y592 693 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 PCDHA3Q9Y5H8 950 aa17.81■□□□□ 0.44
RAB40C-210ENST00000566290 THAP12O43422 761 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 CAND2O75155 1236 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 ITGB3P05106 788 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 PEX5P50542 639 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 WDR5P61964 334 aaKnown RBP17.8■□□□□ 0.44
RAB40C-210ENST00000566290 C2orf54Q08AI8 447 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 MYO1EQ12965 1108 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 PLEKHG4Q58EX7 1191 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 NAA35Q5VZE5 725 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 C8orf74Q6P047 294 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 CDR2LQ86X02 465 aaPredicted RBP17.8■□□□□ 0.44
RAB40C-210ENST00000566290 DNAAF5Q86Y56 855 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 CYFIP2Q96F07 1278 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 OSMRQ99650 979 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 CELF4Q9BZC1 486 aaKnown RBP17.8■□□□□ 0.44
RAB40C-210ENST00000566290 VIPAS39Q9H9C1 493 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 DPP3Q9NY33 737 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 OGFRQ9NZT2 677 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 STRIP2Q9ULQ0 834 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 UBQLN1Q9UMX0 589 aaKnown RBP17.8■□□□□ 0.44
RAB40C-210ENST00000566290 L1RE1Q9UN81 338 aa17.8■□□□□ 0.44
RAB40C-210ENST00000566290 PACSIN2Q9UNF0 486 aaPredicted RBP17.8■□□□□ 0.44
RAB40C-210ENST00000566290 NOC2LQ9Y3T9 749 aaKnown RBP17.8■□□□□ 0.44
RAB40C-210ENST00000566290 TCRBV5S1A1TA0A578 114 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 MAP2K7O14733 419 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 PARNO95453 639 aaKnown RBP17.79■□□□□ 0.44
RAB40C-210ENST00000566290 NPTXRO95502 500 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 RHOXF2BP0C7M4 288 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 PNPLA4P41247 253 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 OSTNP61366 133 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 MRPS6P82932 125 aaKnown RBP17.79■□□□□ 0.44
RAB40C-210ENST00000566290 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.79■□□□□ 0.44
RAB40C-210ENST00000566290 BEST2Q8NFU1 509 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 HPDLQ96IR7 371 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 RUNDC3BQ96NL0 473 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 RHOXF2Q9BQY4 288 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms