RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TMLHEQ9NVH6 421 aa22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 CLUHO75153 1309 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 A8MXQ7 604 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 HCRTO43612 131 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 LRRN2O75325 713 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 WEE2P0C1S8 567 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 PRKCSHP14314 528 aaPredicted RBP22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 RAP1GAPP47736 663 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 CDH8P55286 799 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 C4orf50Q6ZRC1 276 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 ELMO3Q96BJ8 720 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 TNIP3Q96KP6 325 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 NAT10Q9H0A0 1025 aaKnown RBP22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 CRTAC1Q9NQ79 661 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 ABI2Q9NYB9 513 aaPredicted RBP22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 MAGEC2Q9UBF1 373 aaPredicted RBP22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 GTF3C4Q9UKN8 822 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 USTQ9Y2C2 406 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 GREB1Q4ZG55 1949 aa22.48■■□□□ 1.19
SHCBP1-205ENST00000566016 MYBPHLA2RUH7 354 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 CCL16O15467 120 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 PDGFRBP09619 1106 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 EEF1GP26641 437 aaKnown RBP22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 MYL5Q02045 173 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 MAN2A1Q16706 1144 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 TTC9BQ8N6N2 239 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 B3GALNT2Q8NCR0 500 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 LMO3Q8TAP4 145 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 MYCBPAPQ8TBZ2 947 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 DNAJC25Q9H1X3 360 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 AVENQ9NQS1 362 aaPredicted RBP22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 MYH10P35580 1976 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 GTPBP10A4D1E9 387 aaKnown RBP22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 HAPLN1P10915 354 aaPredicted RBP22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 MTIF2P46199 727 aaKnown RBP22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 ALDH1A3P47895 512 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 PSMC1P62191 440 aaKnown RBP22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 TWF1Q12792 350 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 CDKAL1Q5VV42 579 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 ELMOD1Q8N336 334 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 BPIFA3Q9BQP9 254 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 FUCA2Q9BTY2 467 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 SAMSN1Q9NSI8 373 aaKnown RBP22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 ASB3Q9Y575 518 aa22.47■■□□□ 1.19
SHCBP1-205ENST00000566016 C19orf67A6NJJ6 358 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 ATP2C2O75185 946 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 PTPN1P18031 435 aaKnown RBP22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 TRIM21P19474 475 aaKnown RBP22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 TBXAS1P24557 533 aaPredicted RBP22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 MAGEA11P43364 429 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 EPHB3P54753 998 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 SPATA2LQ8IUW3 424 aaPredicted RBP22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 CRYBG2Q8N1P7 616 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 LEMD2Q8NC56 503 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 PCED1BQ96HM7 432 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 UHRF1Q96T88 793 aaPredicted RBP22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.46■■□□□ 1.193e-6■■■■■ 62.5
SHCBP1-205ENST00000566016 SLC27A5Q9Y2P5 690 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 NR2E1Q9Y466 385 aa22.46■■□□□ 1.19
SHCBP1-205ENST00000566016 DENND4CQ5VZ89 1909 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 KCNJ18B7U540 433 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 LOC730098B7Z3J9 87 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 CILPO75339 1184 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 NDST1P52848 882 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 EPHA5P54756 1037 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 CUL2Q13617 745 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 KCNJ12Q14500 433 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 CCDC142Q17RM4 750 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 MGAT5BQ3V5L5 792 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 TCP11X2Q5H9J9 407 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 IQCEQ6IPM2 695 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 VSTM1Q6UX27 236 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 GRASPQ7Z6J2 395 aaPredicted RBP22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 MYLPFQ96A32 169 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 CEP295NLQ96MC4 621 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 NT5C1BQ96P26 610 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 SEPT5Q99719 369 aaPredicted RBP22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 TUBGCP2Q9BSJ2 902 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 DNAI2Q9GZS0 605 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 DPEP3Q9H4B8 488 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 CEP72Q9P209 647 aa22.45■■□□□ 1.18
SHCBP1-205ENST00000566016 PTPN2P17706 415 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 ATF6P18850 670 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 ANO6Q4KMQ2 910 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 PABPC1LQ4VXU2 614 aaKnown RBP22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 MDH1BQ5I0G3 518 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 CREBRFQ8IUR6 639 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 TATDN2Q93075 761 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 PSMG2Q969U7 264 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 ZNF512Q96ME7 567 aaPredicted RBP22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 NT5C1AQ9BXI3 368 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 GCNT4Q9P109 453 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 DNMT3BQ9UBC3 853 aaKnown RBP22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 HMGXB4Q9UGU5 601 aa22.44■■□□□ 1.18
SHCBP1-205ENST00000566016 ZNF638Q14966 1978 aaKnown RBP22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 SYCE3A1L190 88 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 YWHAEP62258 255 aaKnown RBP22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 RPL10AP62906 217 aaKnown RBP22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 GCNT1Q02742 428 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms