RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ARSHQ5FYA8 562 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 JADE1Q6IE81 842 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 PSAPL1Q6NUJ1 521 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 UNQ6494/PRO21346Q6UXR6 183 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 MON1AQ86VX9 555 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 MAB21L3Q8N8X9 362 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 EZH1Q92800 747 aaPredicted RBP13.8□□□□□ -0.2
RNF40-208ENST00000565995 EXOC4Q96A65 974 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 GCNAQ96QF7 691 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 SEPT5Q99719 369 aaPredicted RBP13.8□□□□□ -0.2
RNF40-208ENST00000565995 SMG9Q9H0W8 520 aaKnown RBP13.8□□□□□ -0.2
RNF40-208ENST00000565995 SMOC1Q9H4F8 434 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
RNF40-208ENST00000565995 ODF2LQ9ULJ1 636 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 LIMCH1Q9UPQ0 1083 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 ADAMTS20P59510 1910 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 FASNP49327 2511 aaKnown RBP13.8□□□□□ -0.2
RNF40-208ENST00000565995 ANKRD11Q6UB99 2663 aaPredicted RBP13.79□□□□□ -0.2
RNF40-208ENST00000565995 TMEM8BA6NDV4 472 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 CAVIN2O95810 425 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 CEACAM1P13688 526 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 CSRP1P21291 193 aaKnown RBP13.79□□□□□ -0.2
RNF40-208ENST00000565995 GJA4P35212 333 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 AVPR1AP37288 418 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
RNF40-208ENST00000565995 ZNF131P52739 623 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 RAD51AP2Q09MP3 1159 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 PDGFRLQ15198 375 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 ELF2Q15723 593 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 MGAT5BQ3V5L5 792 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 TRIM68Q6AZZ1 485 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 C11orf74Q86VG3 221 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 THEM5Q8N1Q8 247 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 P2RY13Q9BPV8 354 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 ASB7Q9H672 318 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
RNF40-208ENST00000565995 RALYQ9UKM9 306 aaKnown RBP13.79□□□□□ -0.2
RNF40-208ENST00000565995 ZMIZ1Q9ULJ6 1067 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
RNF40-208ENST00000565995 LNP1A1A4G5 178 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 C4orf47A7E2U8 309 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 C1QTNF9BB2RNN3 333 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 CYB561D2O14569 222 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 SLC26A4O43511 780 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 APBB3O95704 486 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 C1QTNF9P0C862 333 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 PLA2G4BP0C869 781 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 ARSAP15289 507 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 LIG4P49917 911 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 GNL2Q13823 731 aaKnown RBP13.78□□□□□ -0.2
RNF40-208ENST00000565995 DAB2IPQ5VWQ8 1189 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 TCEAL6Q6IPX3 200 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 SLC39A4Q6P5W5 647 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 METTL23Q86XA0 190 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 GIPC2Q8TF65 315 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 TCEAL3Q969E4 200 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 BICD1Q96G01 975 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
RNF40-208ENST00000565995 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 HHIPQ96QV1 700 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 EDEM2Q9BV94 578 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 ECT2Q9H8V3 914 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 SH2B1Q9NRF2 756 aaPredicted RBP13.78□□□□□ -0.2
RNF40-208ENST00000565995 STYXL1Q9Y6J8 313 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 LAMA5O15230 3695 aa13.78□□□□□ -0.2
RNF40-208ENST00000565995 CDX4O14627 284 aaPredicted RBP13.77□□□□□ -0.21
RNF40-208ENST00000565995 GIPC1O14908 333 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 HNRNPDLO14979 420 aaKnown RBP13.77□□□□□ -0.21
RNF40-208ENST00000565995 NFICP08651 508 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CSH1P0DML2 217 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CSH2P0DML3 217 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 TCF3P15923 654 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 PTPRBP23467 1997 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 ABCD1P33897 745 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 TAF6P49848 677 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 NOVA1P51513 510 aaKnown RBP13.77□□□□□ -0.21
RNF40-208ENST00000565995 ATP2C1P98194 919 aaPredicted RBP13.77□□□□□ -0.21
RNF40-208ENST00000565995 GTF2BQ00403 316 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CREB5Q02930 508 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 BFSP1Q12934 665 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 DMC1Q14565 340 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 TMEM132DQ14C87 1099 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CACNA1EQ15878 2313 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 TAF12Q16514 161 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 TMEM119Q4V9L6 283 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 PMS2CLQ68D20 193 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 TXNDC8Q6A555 127 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CC2D1AQ6P1N0 951 aaPredicted RBP13.77□□□□□ -0.21
RNF40-208ENST00000565995 RASSF3Q86WH2 238 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CCDC83Q8IWF9 413 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 DCP1BQ8IZD4 617 aaKnown RBP13.77□□□□□ -0.21
RNF40-208ENST00000565995 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CCDC26Q8TAB7 109 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.21
RNF40-208ENST00000565995 OSCP1Q8WVF1 389 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 GATA6Q92908 595 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 CD101Q93033 1021 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 ACDQ96AP0 544 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 PCDH15Q96QU1 1955 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms