RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 OR2I1PQ8NGU4 316 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 SETD7Q8WTS6 366 aaKnown RBP9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 OSCP1Q8WVF1 389 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 C18orf25Q96B23 403 aaPredicted RBP9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 IFT74Q96LB3 600 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 PI4K2AQ9BTU6 479 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 TM6SF1Q9BZW5 370 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 ZDHHC5Q9C0B5 715 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 CCDC113Q9H0I3 377 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 FAM124BQ9H5Z6 455 aaPredicted RBP9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 TTC12Q9H892 705 aaPredicted RBP9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 IL21Q9HBE4 155 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 TNFSF13BQ9Y275 285 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 TIMM13Q9Y5L4 95 aaPredicted RBP9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
VPS9D1-205ENST00000565452 ATXN2Q99700 1313 aaKnown RBP9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 ATG2BQ96BY7 2078 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 MTMR11A4FU01 709 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 RRP8O43159 456 aaKnown RBP9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 ZBTB24O43167 697 aaPredicted RBP9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 GJB3O75712 270 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 SOAT2O75908 522 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 GNSP15586 552 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 SSRP1Q08945 709 aaKnown RBP9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 NTRK3Q16288 839 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 PLEKHG6Q3KR16 790 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 EOGTQ5NDL2 527 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 OVOS1Q6IE37 1185 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 DSTYKQ6XUX3 929 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 FBXL16Q8N461 479 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 DEFB119Q8N690 84 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 MRPS31Q92665 395 aaKnown RBP9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 SEPT5Q99719 369 aaPredicted RBP9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 CDC6Q99741 560 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 TCHPQ9BT92 498 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 PCOLCE2Q9UKZ9 415 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 NUP205Q92621 2012 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 THADAQ6YHU6 1953 aa9.83□□□□□ -0.84
VPS9D1-205ENST00000565452 A0A087WWV3 80 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 TEX51A0A1B0GUA7 166 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 MYMKA6NI61 221 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 CBFA2T3O75081 653 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 F11P03951 625 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 ITPKBP27987 946 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 NLRP12P59046 1061 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 DMP1Q13316 513 aaPredicted RBP9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 MTF1Q14872 753 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 MGAT5BQ3V5L5 792 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 SYCP2LQ5T4T6 812 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 TXNDC8Q6A555 127 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 GPR155Q7Z3F1 870 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 TXNDC5Q8NBS9 432 aaKnown RBP9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 TTC16Q8NEE8 873 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 GIPC2Q8TF65 315 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 HMGB4Q8WW32 186 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 FCRL3Q96P31 734 aaPredicted RBP9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 LPIN3Q9BQK8 851 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 BACH2Q9BYV9 841 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 CNTN3Q9P232 1028 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 SUSD2Q9UGT4 822 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
VPS9D1-205ENST00000565452 PDCD11Q14690 1871 aaKnown RBP9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 CFAP46Q8IYW2 2715 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 LARGE1O95461 756 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 KLF8O95600 359 aaPredicted RBP9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 NFATC1O95644 943 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 NTRK1P04629 796 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 EDN1P05305 212 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 MCF2P10911 925 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 HLA-EP13747 358 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 CYP11B2P19099 503 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 TYMPP19971 482 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 TIE1P35590 1138 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 EIF2S3P41091 472 aaKnown RBP9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 SMARCB1Q12824 385 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 CAMK2BQ13554 666 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 EML3Q32P44 896 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 BLOC1S2Q6QNY1 142 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 Q6ZUG5 572 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 EFCAB13Q8IY85 973 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 RGL4Q8IZJ4 473 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 ALLCQ8N6M5 410 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 TTC9BQ8N6N2 239 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 CEP120Q8N960 986 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 C2orf15Q8WU43 125 aaKnown RBP9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 BSNDQ8WZ55 320 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 BRF1Q92994 677 aa9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 ACO2Q99798 780 aaKnown RBP9.81□□□□□ -0.84
VPS9D1-205ENST00000565452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 TCRBV21S2A2A0A5A6 115 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 SGK1O00141 431 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 ZNF217O75362 1048 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 DEXIO95424 95 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 USP17L7P0C7H9 530 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 ATXN1LP0C7T5 689 aaKnown RBP9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 HNRNPLP14866 589 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 PAX3P23760 479 aa9.8□□□□□ -0.84
VPS9D1-205ENST00000565452 TNFRSF4P43489 277 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms