RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 F11P03951 625 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 CSH1P0DML2 217 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 CSH2P0DML3 217 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 DLATP10515 647 aaKnown RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 CHRNB1P11230 501 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 ATF6P18850 670 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 LMO2P25791 158 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 PCSK1P29120 753 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 CASP1P29466 404 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 GNL1P36915 607 aaPredicted RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 GRIK1P39086 918 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 MLLT6P55198 1093 aaPredicted RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 NLRP12P59046 1061 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 DNM1Q05193 864 aaKnown RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 TNK2Q07912 1038 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 FCHO2Q0JRZ9 810 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 TRPC3Q13507 836 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 E2F4Q16254 413 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 SOWAHAQ2M3V2 549 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 FAM26FQ5R3K3 315 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 TXNDC8Q6A555 127 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 ATL3Q6DD88 541 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 UNC13DQ70J99 1090 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 HS2ST1Q7LGA3 356 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 TRAPPC11Q7Z392 1133 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 RALGPS2Q86X27 583 aaPredicted RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 CBWD2Q8IUF1 395 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 ADGRF2Q8IZF7 708 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 TOP6BLQ8N6T0 577 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 XXYLT1Q8NBI6 393 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 STKLD1Q8NE28 680 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 OR5B17Q8NGF7 314 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 MRPS31Q92665 395 aaKnown RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 CYP2S1Q96SQ9 504 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 MKNK1Q9BUB5 465 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 TRPC7Q9HCX4 862 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 RBM12Q9NTZ6 932 aaKnown RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 TDP1Q9NUW8 608 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 OBP2AQ9NY56 170 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 NCDNQ9UBB6 729 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 SERTAD1Q9UHV2 236 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 PCDHGA2Q9Y5H1 932 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 TDRD15B5MCY1 1934 aaKnown RBP6.88□□□□□ -1.31
TCF4-228ENST00000565393 PVALEFA0A1B0GWK0 134 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 SPECC1L-ADORA2AF8WAN1 911 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 GABRDO14764 452 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 TGFB1I1O43294 461 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 HCRTO43612 131 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 EXOC3O60645 756 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 ABL1P00519 1130 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 HMGA1P17096 107 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 DDX6P26196 483 aaKnown RBP eCLIP6.87□□□□□ -1.31
TCF4-228ENST00000565393 ANXA13P27216 316 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 WEE1P30291 646 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 HOXD13P35453 343 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 CCR3P51677 355 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 SNRPFP62306 86 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 PLCB2Q00722 1185 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 AMPD2Q01433 879 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 CUL4BQ13620 913 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 RUNX3Q13761 415 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 LRRC32Q14392 662 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 PON2Q15165 354 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 MAPRE1Q15691 268 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 SNRNP35Q16560 246 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 KNOP1Q1ED39 458 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 ITPRIPL2Q3MIP1 535 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 WDR72Q3MJ13 1102 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 INTS6LQ5JSJ4 861 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 DGKKQ5KSL6 1271 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 HEATR6Q6AI08 1181 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 C1orf228Q6PIY5 440 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 C4orf50Q6ZRC1 276 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 MON1AQ86VX9 555 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 OSTM1Q86WC4 334 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 WDR49Q8IV35 697 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 SPEM1Q8N4L4 309 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 FSIP1Q8NA03 581 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 SUMF1Q8NBK3 374 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 OR6B3Q8NGW1 331 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 CXorf38Q8TB03 319 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 USP13Q92995 863 aaPredicted RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 MSANTD3Q96H12 275 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 FAM126AQ9BYI3 521 aaPredicted RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 EBF3Q9H4W6 596 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 MAGEF1Q9HAY2 307 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 IL21Q9HBE4 155 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 ABCB6Q9NP58 842 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 AGPAT3Q9NRZ7 376 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 UXTQ9UBK9 157 aaPredicted RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 NXF1Q9UBU9 619 aaKnown RBP6.87□□□□□ -1.31
TCF4-228ENST00000565393 SIX4Q9UIU6 781 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 ZMYM5Q9UJ78 669 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 RCOR1Q9UKL0 485 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 CDH9Q9ULB4 789 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 RAB23Q9ULC3 237 aa6.87□□□□□ -1.31
TCF4-228ENST00000565393 NCANO14594 1321 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PTPRJQ12913 1337 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 TRAV19A0A0A6YYK7 116 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms