RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CSGALNACT2Q8N6G5 542 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 MAB21L3Q8N8X9 362 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 STKLD1Q8NE28 680 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 LEO1Q8WVC0 666 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 USP13Q92995 863 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 SECISBP2LQ93073 1101 aaKnown RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 ACBD6Q9BR61 282 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 CBWD1Q9BRT8 395 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 PI4K2AQ9BTU6 479 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 HPS4Q9NQG7 708 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 GKN1Q9NS71 199 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 GDAP2Q9NXN4 497 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 ZMYM5Q9UJ78 669 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 L1RE1Q9UN81 338 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 MTMR6Q9Y217 621 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 PCDHB5Q9Y5E4 795 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 ZFHX4Q86UP3 3567 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 GOLGA8IPA6NC78 632 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 GOLGA8JA6NMD2 632 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PRR5-ARHGAP8B1AHC4 643 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 HCRTO43612 131 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 EXTL3O43909 919 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PRPF40AO75400 957 aaKnown RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 TADA3O75528 432 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 NOL4O94818 638 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PRPF6O94906 941 aaKnown RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 LDHAP00338 332 aaKnown RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 ACAT1P24752 427 aaKnown RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 CYP2F1P24903 491 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 CNR2P34972 360 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 HOXD13P35453 343 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 ARHGAP8P85298 464 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 SPEM2Q0P670 501 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 SIM2Q14190 667 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 NFE2Q16621 373 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 DDR2Q16832 855 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 ITPRIPL2Q3MIP1 535 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 TMEM196Q5HYL7 178 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 TRIM68Q6AZZ1 485 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PKN3Q6P5Z2 889 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 CCDC73Q6ZRK6 1079 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 LIMS2Q7Z4I7 341 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 LONP2Q86WA8 852 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 OSTM1Q86WC4 334 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 TMEM86AQ8N2M4 240 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 LRRC52Q8N7C0 313 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 GLIS3Q8NEA6 775 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 MYRFLQ96LU7 910 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 ZNF560Q96MR9 790 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 GCNAQ96QF7 691 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 USP28Q96RU2 1077 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PCIF1Q9H4Z3 704 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 FBRSL1Q9HCM7 1045 aaKnown RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PDE11AQ9HCR9 933 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 ABCB6Q9NP58 842 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 TDP1Q9NUW8 608 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PANK4Q9NVE7 773 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 THG1LQ9NWX6 298 aaKnown RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 DDX43Q9NXZ2 648 aaKnown RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 RBAKQ9NYW8 714 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-213ENST00000565173 GTF3C4Q9UKN8 822 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 ITGA11Q9UKX5 1188 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 EXOC7Q9UPT5 735 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 PTPRJQ12913 1337 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 DENND4CQ5VZ89 1909 aa9.23□□□□□ -0.93
CAPN3-213ENST00000565173 TRDMT1O14717 391 aaKnown RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 LRP3O75074 770 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 RETP07949 1114 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 CSH1P0DML2 217 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 CSH2P0DML3 217 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 IDEP14735 1019 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 ARSAP15289 507 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 SDHBP21912 280 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 DDX6P26196 483 aaKnown RBP eCLIP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 AVPR1AP37288 418 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 TXLNAP40222 546 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 NASPP49321 788 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 TSPY1Q01534 308 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 LMNB2Q03252 620 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 ALCAMQ13740 583 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 RUNX3Q13761 415 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 E2F4Q16254 413 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 TAF12Q16514 161 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 SOWAHAQ2M3V2 549 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 CFAP221Q4G0U5 840 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 INTS6LQ5JSJ4 861 aaKnown RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 HEATR6Q6AI08 1181 aaKnown RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 FSTL4Q6MZW2 842 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 FAM171BQ6P995 826 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 PRR23BQ6ZRT6 265 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 MON1AQ86VX9 555 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 WDR5BQ86VZ2 330 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 SYCP3Q8IZU3 236 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 TOP6BLQ8N6T0 577 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 OR5B17Q8NGF7 314 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 SPATA18Q8TC71 538 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 CACTINQ8WUQ7 758 aaKnown RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 HPS3Q969F9 1004 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms